Pleomorphomonas sp. SM30: OHA_1_00825
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Entry
OHA_1_00825 CDS
T05766
Symbol
ttgR_1
Name
(GenBank) HTH-type transcriptional regulator TtgR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleo03000
]
OHA_1_00825 (ttgR_1)
Transcription factors [BR:
pleo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OHA_1_00825 (ttgR_1)
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Ortholog
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GFIT
Motif
Pfam:
TetR_N
TetR_C_13_2
TetR_C_13
HTH_20
HTH_AsnC-type
HTH_AraC
DUF6262
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBE71255
LinkDB
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Position
1:complement(893729..894328)
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AA seq
199 aa
AA seq
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MRASETRRQIVEVADRLFYEIGYEATSFADIARDVGLSRGNFYYHFKTKDEILDAVIERR
AATVHALLDTWEDAGESPSDRIRSFVRILVENRTKIMAHGCPVGTLCAELSKLQHAARDD
AARLFALFRTWLARQFVALGHEGEADALALHLLMRSQGVAALATAFRDEDFIRREVADME
AWLEARCPAAPSTVSHRPD
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagcgaaacgcgtcggcagatcgtggaagtcgcggatcggctcttctacgag
atcggctacgaggccacctccttcgccgacatcgcccgcgacgtcgggctgtcgcgagga
aatttctattatcatttcaagacgaaggacgagattctggatgcggtgatcgaacggcgc
gcggccacggtgcacgccctgctcgacacctgggaggacgccggggaatcgccgtccgac
cggatccggagcttcgtgcgcatcctcgtcgagaaccggacgaagatcatggcgcacggc
tgtcccgtcgggacgctctgcgccgaactgtccaagctgcagcacgccgccagggacgac
gccgcccgcctgttcgccctgttccggacttggctcgcgcggcagttcgtggcgctggga
cacgagggtgaagcggacgcgctggccctgcaccttctgatgcgcagccaaggcgtcgcc
gcgctcgcgacggccttccgcgacgaggacttcatccgccgcgaggtcgccgacatggaa
gcctggctggaggcgcggtgtccggccgcgccgtcaaccgtttcccaccgaccggactga
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