Pleomorphomonas sp. SM30: OHA_1_00856
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Entry
OHA_1_00856 CDS
T05766
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleo03032
]
OHA_1_00856 (gyrA)
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_00856 (gyrA)
Enzymes [BR:
pleo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OHA_1_00856 (gyrA)
DNA replication proteins [BR:
pleo03032
]
Prokaryotic type
DNA Topoisomerases
OHA_1_00856 (gyrA)
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OHA_1_00856 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2118
Motif
Other DBs
NCBI-ProteinID:
BBE71285
LinkDB
All DBs
Position
1:927774..930518
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AA seq
914 aa
AA seq
DB search
MADDDNRPAGTEPPADIKPISISDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYS
MHENGYEWNKPYRKSARVVGDVIGKYHPHGDQSIYDALVRMAQPFSMRLPLVDGQGNFGS
VDGDPPAAMRYTEVRLEKVANALTDDLDKDTVDFTPNYDNSEREPSVLPARFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDATIRVMDQPDVEIEDLMDIVPGPDFPTGAQILGRSGIRQ
AYLTGRGSVVMRGRATIEEIRKDREAIIVTEIPYQVNKAAMVEKIAELVKEKRIEGIADL
RDESDRQGMRVVIELKRDAVGDVILNQLYRFSPLQTSFGVNMVALNGGRPEVMNLKDVLV
AFVGFREVVVTRRTRFLLGKARDRAHVLVGLAIAVANIDEVIQLIRNAPDPATAREQLMT
RRWPAHDVAPLIRLIDDPRHTVNEDGTYNLSEEQARAILDLRLQRLTALGRDEIADELNK
LADEIKDYLDILGSRARVLEIIRTELTDLKTAFATPRRTEILESDADMEDEDLIAREDMV
VTVSHEGYIKRVPLSAYRAQRRGGKGRSGMATKEEDFVVRLFVANTHTPVLFFSSRGIAY
KMKVWRLPLGNPQSRGKFIKNLLPLQDGERITSILALPEDEETWADLDVVFATRFGTVRR
NKLSDFTNVNRNGKIAMKFDDEADGIVGVETCTENDDFLLVSALGQCIRFSVTDVRVFKG
RDSTGVRGIALGEGDQLISLTILRHFEAEPAERDLFQKQWNANQRAVTGEEADLEDADTD
EADEEIGGDAQLSPERYAEMDANQQFVLTVNEKGYGKRSSSYQFSIKGRGGKGNKATDQT
KLDEIGKLVAAFPVEATDQIMLISDGGQLIRVPVEGIRIASRASKGVRIFTTGEGERVVG
VEHLSDIGEGGEEG
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgacgacaaccgaccggcgggcacggagccgcccgccgacatcaagccgatc
tcgatctccgacgagatgaagcgcagctatctcgactacgccatgagcgtgatcgtgagc
cgtgccctcccggatgtccgcgacggcctgaaaccggtgcaccggcgcatcctctactcg
atgcacgagaacggctacgagtggaacaagccgtatcgcaagtccgcccgcgtcgtcggc
gacgtcatcggtaagtatcacccgcacggcgaccagtcgatctacgacgccttggtgcgc
atggcgcagccgttctcgatgcggctgccgctggtggacggtcagggcaacttcggctcg
gtcgacggcgatccgccggcggcgatgcgctacaccgaggtccggctcgagaaggtcgcc
aacgcgctgaccgacgacctcgacaaggacaccgtcgacttcacgccgaactacgacaac
tcggaacgcgagccgtcggtgctgccggcgcgcttcccgaacctgctggtcaacggcgcc
ggcggcatcgccgtcggcatggccaccaacatcccgccgcacaatctcggcgaggtcatc
gacgccaccatccgcgtgatggaccagcccgacgtcgagatcgaggacctgatggacatc
gtgccgggtccggacttcccgaccggcgcccagatcctcggccgctccggcatccggcag
gcctatctcaccggccgcggctcggtggtgatgcgcggccgcgccacgatcgaggagatc
cgcaaggatcgcgaggcgatcatcgtcacggagatcccctaccaggtcaacaaggccgcg
atggtcgagaagatcgcggaactggtgaaggagaagcggatcgagggcatcgcggacctg
cgcgacgagtccgaccgccagggcatgcgggtggtgatcgagctgaagcgcgacgccgtc
ggcgacgtgatcctgaaccagctctaccgcttctcgccgctgcagacctcgttcggcgtc
aacatggtggcgctgaacggtggccggcccgaggtgatgaacctcaaggacgtgctggtc
gctttcgtcggcttccgcgaggtggtggtcacccgccgcacccgcttcctgctcggcaag
gcgcgcgaccgcgcccacgtcctcgtcggcctcgccatcgccgtcgccaacatcgacgag
gtcatccagctgatccgcaacgcgccggatccggccaccgcccgcgagcagctgatgacg
cggcgctggccggcacacgacgtcgcgccgctgatccgcctgatcgacgacccgcgccac
accgtcaacgaggacggcacctacaacctctccgaggagcaggcccgcgccattctcgat
ctgcgcctgcagcgcctcacggcgctcggccgcgacgagatcgccgacgagctcaacaag
ctcgccgacgagatcaaggactatctcgacatcctcggctcgcgtgcccgggtgctggag
atcatccgcaccgaactcaccgacctcaagaccgccttcgccacgccgcgccggaccgag
atcctcgaatccgacgccgacatggaggacgaggacctgatcgcccgcgaggacatggtc
gtgaccgtgtcgcacgagggctacatcaagcgtgtgccgctgtcggcctaccgggcgcag
cggcgcggcggcaagggccgctcgggcatggcgaccaaggaggaggatttcgtcgtccgc
ctgttcgtcgccaacacccacacgccggtgctgttcttctcctcgcgcggcatcgcctac
aagatgaaggtctggcgtctgccgctcggcaatccgcagtcgcgcggcaagttcatcaag
aacctcctgccgctgcaggacggcgagcgcatcacctcgatcctggccctgcccgaggac
gaggagacctgggccgatctcgacgtggtgttcgcgacccgcttcggcaccgtgcgccgc
aacaagctgagcgacttcaccaacgtgaaccgcaacggcaagatcgcgatgaagttcgac
gacgaggcggacggcatcgtcggcgtcgagacctgcaccgagaacgacgacttcctgctc
gtctcggcgctcggccagtgcatccgtttctcggtgaccgatgtccgcgtcttcaagggc
cgcgattccaccggcgtgcgcggcatcgcgctcggcgagggcgatcagctgatctcgctg
acgatcctgcgccatttcgaggcagagccggccgagcgcgacctgttccagaagcagtgg
aacgccaaccagcgcgcggtcaccggcgaagaggccgatctcgaggacgccgacaccgac
gaggccgacgaggagatcggcggcgacgcccagctctcgccggagcgctacgccgagatg
gacgccaaccagcagttcgtcctgaccgtcaacgagaagggctacggcaagcgctcgtcg
tcctatcagttctcgatcaagggccgcggcggcaagggcaacaaggcgaccgaccagacc
aagctcgacgagatcggcaagctcgtcgccgccttccccgtagaggcgaccgaccagatc
atgctgatctcggacggcggccagctgatccgcgtgccggtcgagggcatccgcatcgcc
tcgcgcgcgtcgaagggcgtgcgcatcttcaccaccggcgagggcgagcgcgtcgtcggt
gtcgagcacctctcggacatcggcgagggcggcgaggagggctga
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