Pleomorphomonas sp. SM30: OHA_1_01024
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Entry
OHA_1_01024 CDS
T05766
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OHA_1_01024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_01024
Enzymes [BR:
pleo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OHA_1_01024
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OHA_1_01024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBE71450
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All DBs
Position
1:1116751..1117524
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AA seq
257 aa
AA seq
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MIARPPTLRPLRRAIRATVGAPIAAPTVARARRSRHPRGMTTRFPLDPPRDCPRCPRLVA
FREAARAAEPTWHNAPVASFGPAGARLLIVGLAPGLRGANRTGRPFTGDYAGDLLYETLV
DFGFARGTYRADPADGLELLDAAITNAVRCVPPENKPTGPEIAACRPFFEATLAAREGTR
ALVALGRIAHDQVLRTLALPVTRFPFGHGAVHDLAPARAFRLYDSYHCSRYNTNTGRLTR
EMFRAVFARIADDLAAA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcacgtccgcccacgcttcgaccgctccgccgcgcgatccgcgccaccgtcggc
gccccgatcgccgcgccgaccgttgcgcgggcgcgccgcagccgccaccctcgcggcatg
accacgcgattccccctcgatccgccgcgcgactgcccgcgctgcccccgcctcgtcgcc
ttccgcgaggccgcccgcgccgccgagccgacctggcacaacgcgcccgtggcgagcttc
ggcccggcgggcgcgcgcctgctgatcgtcgggctggcgcccgggctgcgcggcgccaac
cgcaccggccggccgttcaccggcgactacgccggtgacctgctctacgagaccctggtc
gacttcggcttcgcgcgcggcacctatcgcgccgatccggccgacggcctcgaactcctc
gacgccgccatcaccaacgccgtgcgctgcgtgccgcccgagaacaagccgaccggcccg
gagatcgccgcctgccggccgttcttcgaggcgaccctcgccgcacgcgaaggtacccgc
gcgctggtcgcgctcggccgcatcgcccacgaccaggtgctgcgcacgctcgccctgccg
gtgacgcgctttcccttcggccacggcgcggtccacgatctcgccccggcccgggccttc
cggctctacgacagttaccactgctcgcgctacaacacgaacaccggccggctcacccgc
gagatgttccgcgccgtgttcgcccgcatcgccgacgacctcgccgccgcctga
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