Pleomorphomonas sp. SM30: OHA_1_01321
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Entry
OHA_1_01321 CDS
T05766
Symbol
lsrB_1
Name
(GenBank) autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OHA_1_01321 (lsrB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleo02000
]
OHA_1_01321 (lsrB_1)
Transporters [BR:
pleo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
OHA_1_01321 (lsrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBE71738
LinkDB
All DBs
Position
1:1428438..1429430
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AA seq
330 aa
AA seq
DB search
MKLWKKLAVTTAAVLALSTATASAETVRIALVVKALGIGFFEAANKGAQEAAKELGDVEV
IYTGPTSTTAEGQIEVINALIAQKVNAIAVSANDKDALVPALKKAQERGITVISWDSGVA
TEGRAMHLNPSSNALIGNMCVKMAADNLTEPGEVAILSATATSTNQNTWIEEMKKVLPNY
PNVKLVDTVYGDDLADKSYRETQGLIQKYPNLKAIIAPTSVGIVAAAQAVTDAGKTGQIN
VTGLGLPSEMAGHVKSGASKSFAIWNPIDLGYAATTIAYNLATGKAKAGPGAEIPMGRMG
TVKLDDNAEGAMADPFVYDASNVEEFAKIF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctggaagaaactcgccgtcaccacggcggccgtgctggcgctgtccaccgcg
accgcctcggccgagaccgtcaggatcgcgctggtggtcaaggcgctcggcatcggcttc
ttcgaggccgccaacaagggcgcccaggaagcggccaaggaactcggcgacgtcgaggtc
atctacaccggcccgaccagcaccaccgccgaaggccagatcgaggtgatcaacgccctg
atcgcccagaaggtgaacgccatcgcggtctcggccaacgacaaggacgccctcgtcccg
gcgctgaagaaggcgcaggagcgcggcatcacggtgatttcgtgggattcgggcgtcgct
accgagggccgcgccatgcacctcaacccgtcgtccaacgcgctgatcggcaacatgtgc
gtcaagatggctgccgacaacctgaccgagccgggcgaggtcgcgatcctctcggccacc
gccacctccacgaaccagaacacctggatcgaggagatgaagaaggtgctgccgaactat
ccgaacgtgaagctggtcgacacggtctacggcgacgacctcgccgacaagtcctaccgc
gagacgcagggcctgatccagaagtacccgaacctgaaggcgatcatcgcgccgacctcg
gtcggcatcgtcgccgccgcccaggccgtgaccgacgccggcaagaccggccagatcaac
gtcaccggcctcggcctgccctcggagatggccggccatgtcaagtcgggcgcctcgaag
tccttcgcgatctggaacccgatcgacctcggctacgccgccaccacgatcgcctacaac
ctcgccaccgggaaggcgaaggccggtccgggcgccgagatcccgatgggccggatgggc
acggtgaagctcgacgacaacgccgagggcgccatggccgacccgttcgtctacgacgcc
tccaacgtcgaggaattcgccaagatcttctga
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