Pleomorphomonas sp. SM30: OHA_1_01474
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Entry
OHA_1_01474 CDS
T05766
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleo03032
]
OHA_1_01474 (gyrB)
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_01474 (gyrB)
Enzymes [BR:
pleo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OHA_1_01474 (gyrB)
DNA replication proteins [BR:
pleo03032
]
Prokaryotic type
DNA Topoisomerases
OHA_1_01474 (gyrB)
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OHA_1_01474 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BBE71889
LinkDB
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Position
1:complement(1591899..1594328)
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AA seq
809 aa
AA seq
DB search
MSEAARLAADEYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALA
GYADEVRVTLNPDGSCTVSDNGRGIPTDIHSGEGVSAAEVIMTQLHAGGKFDQNSYKVSG
GLHGVGVSVVNALSVWLRLRIWRAGREHRMSFTHGVADAPLEVVGEAAGRTGTEVSFLPS
TDTFKGVIEFDYATLERRLRELAFLNSGVRILLTDARGVEPKSEELHYEGGLEAFVRYLD
RSRKPLIGKPVTVAAARDGITVEVALWWNDSYHENVLCFTNNIPQRDGGTHLAGFRAALT
RQVTSYAEASGILKREKVTLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVE
SALNEAFATWFEEHQPEARTVVGKVVEAAAAREAARKARELTRRKGALDMASLPGKLAEC
QDRDPANTELFLVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLSSAEIGTL
ITALGTGIGTDEFDPTKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMGQLIERGHVYIA
QPPLYKVTKGKSESYLKNEHALEDYLIDQGLDDAVLRLATGEERAGQDLRAVVDRARQVK
AVLDGLHHRYDRSVVEQAAIAGALNADVLTDATKAAEAAAYVARRLDILADEFEKGWTGE
AREDGGLVFRRTVRGVTEVATIDPALLSSADARKLDGHARHLQDVYGKAAGLRRKDGETA
IRGPRALLDAVFAIGRKGISLQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVADGTEADD
IFERLMGDDVEPRRDFIQTNALNVSNLDV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgcccgcctcgccgccgatgaatacggcgcggaatcgatcaaggtcctg
aagggcctcgacgccgtccgcaagcgcccgggcatgtacatcggcgacaccgacgacggt
tccggcctgcaccacatggtctacgaggtggtggacaacgccatcgacgaggcgctcgcc
ggctacgccgacgaggttcgcgtgacgctgaacccggacggctcctgcacggtctccgac
aacggccgcggcatcccgaccgacatccactcgggcgagggcgtctcggcggccgaggtc
atcatgacccagctgcacgccggcggtaagttcgaccagaacagctacaaggtctcgggc
ggcctgcacggcgtcggcgtctcggtggtgaacgccctgtcggtctggctgcgcctcagg
atctggcgcgccggccgcgagcaccggatgagcttcacccacggcgtcgccgacgcgccg
ctcgaggtcgtcggcgaggcggctgggcgcaccggcaccgaggtcagcttcctgccgagc
accgacaccttcaagggcgtgatcgagttcgactacgccacgctggagcggcgcctgcgc
gaactcgccttcctgaactccggcgtccgcatcctgttgaccgacgcccgcggcgtcgag
ccgaagagcgaggagctgcactacgagggcggcctcgaggccttcgtccgctatctcgac
cgctcccgcaagccgctgatcggcaagccggtgacggtggccgcggcgcgcgacggcatc
acggtcgaggtggcgttgtggtggaacgacagttaccacgagaacgtgctctgcttcacc
aacaacatcccccaacgtgacggcggcacccatctcgccggcttccgcgccgcgctgacc
cggcaggtgacgtcctacgccgaggcgtccggcatcctgaagcgcgagaaggtcacgctc
accggcgacgactgccgcgagggcctgaccgcggtgctctcggtcaaggtgcccgacccg
aagttctcgagccagaccaaggacaagctggtctcctcggaggtccgtccggtcgtcgag
agcgcgctcaacgaggctttcgcgacatggttcgaggagcaccagcccgaggcgcgcacc
gtcgtcggcaaggtggtcgaggccgccgccgcccgtgaggcggcgcgcaaggcgcgcgaa
ctgacccggcgcaagggcgcgctcgacatggcctcgctgcccggcaagctcgccgagtgc
caggaccgcgaccccgccaacaccgaactcttcctggtcgaaggcgactcggccggcggc
tccgccaagcagggccgcaaccgcgagttccaggccgtgctgccgctgcgcggcaagatc
ctcaacgtcgagcgcgcccgcttcgacaagatgctgtcgtcggccgaaatcggcacgctg
atcaccgcgctcggcaccggtatcgggaccgacgaattcgacccgaccaagctgcgctac
cacaagatcatcatcatgacggacgccgacgtcgacggcgcccacatccgcaccctgctg
ctgaccttcttcttccggcagatgggccagttgatcgagcgcggccacgtctacatcgcc
cagccgccgctctacaaggtgaccaagggcaagtccgagagctacctcaagaacgagcac
gccctcgaggactacctgatcgaccagggcctcgacgacgccgtgctgcgcctcgccacc
ggcgaggagcgcgccggccaggacctgcgcgccgtcgtcgaccgcgcccggcaggtcaag
gcggtcctcgacggcctgcaccaccgctacgaccgctcggtggtcgagcaggccgccatc
gccggcgccctcaacgccgacgtcctcaccgacgcgaccaaggccgccgaggccgccgcc
tacgtggcgcgccggctcgacatcctcgccgacgagttcgagaagggctggaccggcgag
gcgcgcgaggacggcggtctggtgttccgccgcaccgtgcgcggcgtcaccgaggtcgcc
accatcgacccggcgctgttgtcctcggccgacgcccgcaagctcgacggccacgcccgc
cacctccaggacgtctacggcaaggccgcgggcctgcgccgcaaggacggcgagaccgcc
atccgcggcccgcgcgccctgctcgacgccgtcttcgcgatcggccgcaagggcatttcg
ctgcagcgctacaagggcctcggcgagatgaacgccgagcagctgtgggaaaccaccctc
gaccccaacgtccgctcgctgctccaggtcaaggtcgccgacggcaccgaggccgacgac
atcttcgagcgcctcatgggcgacgacgtcgaaccccgccgcgacttcatccagaccaac
gcgctcaacgtctcgaacctggacgtgtga
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