Pleomorphomonas sp. SM30: OHA_1_02263
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Entry
OHA_1_02263 CDS
T05766
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OHA_1_02263 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_02263 (recD2)
Enzymes [BR:
pleo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OHA_1_02263 (recD2)
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OHA_1_02263 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
Helicase_RecD
AAA_22
HHH
nSTAND3
AAA_28
PIF1
AAA_16
SLFN-g3_helicase
HHH_3
cobW
NTPase_1
HHH_8
AAA_29
MeaB
UvrD-helicase
RsgA_GTPase
AAA_23
AAA_18
AAA_17
NACHT
ABC_ATPase
ABC_tran
AAA
DUF3850
IstB_IS21
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
BBE72665
LinkDB
All DBs
Position
1:complement(2448775..2450961)
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AA seq
728 aa
AA seq
DB search
MTDETKPEHRLFDRLSGTVERVTFHNEDNGFAVLRVKVTGRREPVAVVGHVPSVSAGERI
DAEGAWTTDRTHGLQFKAETIATREPTGRDAIARFLGSGLIAGVGPAMAERIVQTLGADA
LEVIDKEPMRLMKVPGVGRQLAAKIAESYRERKAVKDVMIAFQEKGVGTARAVRIWRHFG
PEAVSVVEGDPYRIAREVRGIGFEGADEIAGKFGIARTAPERLRAGVTYALEDAADGGHT
VVPRGEIAERAARLLGVDADAVVDAIAEAVRHGDVEEVDVDGTSCLSARRLAKLEKSVAI
RLKALAAGRPPWGKVDVDAAIARFEASTRKTLSPSQREALALVAGAKVSVITGGPGVGKT
TLLEALLATVAGSRISVALAAPTGRAARRMAEQAGREAKTLHRLLEVDPATGYFRRGTDE
QLEVDLVVVDEASMVDVPLMAALTEAIGPNAALILIGDVDQLPSVGPGQVLADVIGSGLV
PVARLTEIFRQAEESRIVVNAHRINRGERPEPPAPGETSDFYVVDASGPEDALAKVIEIV
GTRIPRRFGLDPMRDVQVITPMQKGLVGARNLNDRLAELLNPNPVDRVERFGALYAAGDK
VMQVENDYDRDVFNGDLGVLKRIRERDDEVVVSFDGRDVSYGLQDLEALQRAYAVTIHKS
QGSEYPAVVVPLVRDHAVMLARNLLYTAATRGKKLVVLVAEPWALDAAVADHRVRRRWTR
LRELLATP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaaacgaaacccgaacaccgcctgttcgaccggctgtccggaacggtggag
cgcgtcaccttccacaacgaggacaacggcttcgccgtgctgagggtcaaggtgaccggg
cggcgcgagccggtggcggtggtcgggcacgtgccctcggtgagcgccggcgagcggatc
gacgccgagggcgcctggaccaccgaccgcacccacggcctgcagttcaaggccgagacc
atcgccacccgcgagccgaccggccgcgacgccatcgcccgcttcctcggctccggcctg
atcgccggcgtcggtcccgccatggccgagcgcatcgtccagaccctcggcgccgacgcg
ctggaggtgatcgacaaggaaccgatgcggctgatgaaggtgccgggcgtaggccgccag
ctggcggcgaagatcgcggagagctaccgcgagcgcaaggcggtcaaggacgtcatgatc
gccttccaggagaagggcgtcggcaccgcgcgcgcggtcaggatctggcgacacttcgga
ccggaggcggtgtcggtggtcgagggcgatccctaccgaatcgcccgcgaggtccgcggc
atcggtttcgagggcgccgacgagatcgcgggcaagttcggcatcgcccgcaccgcgccg
gagcgcctgcgcgccggagtgacctacgccctcgaggacgccgccgacggcggccacacc
gtggtgccgcgcggggagatcgccgagcgcgccgcccgcctgctcggcgtcgacgccgac
gcggtggtcgacgccatcgccgaggcggtccgccacggcgacgtcgaggaggtcgacgtc
gacggcacgtcctgcctttccgcccgccggctcgccaagctcgagaagtcggtggcgatc
cgcctgaaggcgctcgccgcgggacggccgccgtggggcaaggtcgacgtcgacgccgcc
atcgcccgcttcgaggcgtcgacgaggaagacgctgtcgccctcgcagcgcgaggcgctg
gcgctggtcgccggcgccaaggtctcggtgatcaccggcggccccggcgtcggcaagacc
acgctgctcgaggcgctgctcgccaccgtcgcgggctcgcggatctcggtggcgctcgcc
gccccgaccgggcgcgccgcccgccgcatggccgaacaggccggccgcgaggcgaagacg
ctgcaccgcctgctcgaggtcgatccggccacgggctatttccgccgcggcaccgacgag
cagctcgaggtcgacctcgtggtcgtcgacgaggcctcgatggtcgacgtgccgctgatg
gcggcgctgaccgaggcgatcggcccgaacgcggcgctgatcctgatcggcgacgtcgac
cagctgccctcggtcggccccggccaggtgctcgccgacgtgatcggctcgggcctggtg
ccggtcgcgcggctgaccgagatcttccggcaggccgaggagagccggatcgtcgtcaac
gctcaccgcatcaaccgcggcgaacggccggagccgccggccccgggcgagacctccgac
ttctacgtcgtcgacgcctccggcccggaggacgccctcgccaaggtgatcgagatcgtc
ggcacgcggattccgcgccgcttcgggctcgacccgatgcgcgacgtccaggtgatcacg
ccgatgcagaagggcctcgtcggcgcccgcaacctcaacgaccggctggccgagctgctc
aatccgaacccggtcgaccgcgtcgagcgctttggcgctctctacgccgctggcgacaag
gtgatgcaggtcgagaacgactacgaccgcgacgtcttcaacggcgacctcggcgtgctc
aagcggatccgcgagcgcgacgacgaggtcgtcgtctccttcgacggccgcgacgtctcc
tacggcctgcaggacctcgaggcgctgcagcgcgcctacgccgtcaccatccacaagagc
cagggctcggagtatccggccgtggtggtgccgctggtgcgcgaccacgccgtgatgctc
gcccgcaacctgctctacaccgcggcgacacgcggcaagaagctggtcgtgctggtcgcc
gaaccgtgggcgctcgacgcggcggtcgccgaccaccgcgtccgccggcgctggacccgg
ctcagggagctgctggcgacgccgtga
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