Pleomorphomonas sp. SM30: OHA_1_02939
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Entry
OHA_1_02939 CDS
T05766
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo03030
DNA replication
pleo03430
Mismatch repair
pleo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OHA_1_02939 (dnaX_2)
03430 Mismatch repair
OHA_1_02939 (dnaX_2)
03440 Homologous recombination
OHA_1_02939 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pleo03032
]
OHA_1_02939 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
pleo03400
]
OHA_1_02939 (dnaX_2)
Enzymes [BR:
pleo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OHA_1_02939 (dnaX_2)
DNA replication proteins [BR:
pleo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OHA_1_02939 (dnaX_2)
DNA repair and recombination proteins [BR:
pleo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OHA_1_02939 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_30
AAA_16
RuvB_N
AAA_18
AAA_19
AAA_14
AAA_24
Rad17
AAA_assoc_2
SRP54
AAA_33
TsaE
CbiA
nSTAND3
DUF815
Glyco_tranf_2_5
AAA_28
SKI
Motif
Other DBs
NCBI-ProteinID:
BBE73329
LinkDB
All DBs
Position
1:complement(3218835..3220652)
Genome browser
AA seq
605 aa
AA seq
DB search
MTDETPGAEPKPAAGGYRVLARKYRPQSFADLIGHGPMVQTLRNAFETGRVAQAWMLTGV
RGVGKTTTARILARALNYELPGRAGGPSVDLSEEGVHCRAIMEGRHVDVIEMDAASHTSV
NDVREVIEAARYKPVSARYKVYIVDEVHMLSAAAFNALLKTLEEPPEHVKFVFATTEIRK
VPITVLSRCQRFDLRRIEASVLQAHLARVAAAEKVEVAPEAIALVARAAEGSVRDGLTIL
DQAIAYGGDDGVTPETVRSMLGLADRERVIDLFEAVMKGDVAAALRELSEQYDVGADPAV
VLSDLAAFVHLVTRIRHVPSSADDPALTEAERVRGRAFAEGLSVRVLSRAWQILLKGLAE
VQTAPRPLPAAEMVLVRLAYAADLPTPDEAIRQLRDGLGAPQPGPGPSAGGGGSGGGGAQ
AQGRVLPTLAASSPRPTARALPAREPAALVVASFEDAIRLAERNRDVGLKFALERHVRLV
RFEDGRIEFNPVPGANPGLAGEIGRKLSLWTNRRWIVAVSGETGAPTVAETREATRSRLV
DDARADPTVAAILARFPGAEIVDVQFPDAAGGTGAADGGFDDLGDAPLPDLDGYELVEEF
GDFDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagacgcccggcgccgagccgaagcccgccgccggcggctaccgcgtgctg
gcgcgcaagtaccgcccgcagagcttcgccgacctgatcggccacgggccgatggtccag
accctgcgcaacgccttcgagaccggccgcgtcgcccaggcgtggatgctgaccggcgtg
cgcggcgtcggcaagaccaccaccgcccgcatcctcgcccgcgccctcaactacgagctc
cccggccgcgccggcggtccgtcggtcgacctttccgaggagggcgtgcactgccgcgcc
atcatggagggccggcacgtcgacgtcatcgagatggacgcggcctcgcacacctccgtc
aacgacgtccgcgaggtcatcgaggcggcccgctacaagccggtgtcggcgcgctacaag
gtctacatcgtcgacgaggtgcacatgctctcggcggcggcgttcaacgcgctcctgaag
acgctcgaggagccgcccgagcacgtcaagttcgtgttcgcgaccaccgagatccgcaag
gtgccgatcacggtgctgtcgcgctgccagcgcttcgacctgcgccgcatcgaggcctcc
gtgctgcaggcccatctcgcccgcgtcgccgcggcggagaaggtcgaggtcgcccccgag
gcgatcgccctcgtcgcccgcgccgccgaaggttcggtgcgcgacggtctcaccatcctc
gatcaggcgatcgcctacggtggcgacgacggcgtcacgccggagacggtgcgctccatg
ctcggcctcgccgaccgcgaacgggtgatcgacctgttcgaggcggtgatgaagggcgac
gtcgccgcggcgctgcgcgaactctccgagcaatacgacgtcggcgccgatccggcggtg
gtgctgagcgatctcgccgccttcgtccacctcgtcacccgcatccgccacgttccctcc
agcgccgacgacccggcgctgaccgaggccgagcgcgtgcgcggccgcgccttcgccgaa
ggcctgtcggtgcgcgtgctgtcgcgggcctggcagatcctcctcaagggcctcgccgag
gtgcagaccgccccgcggccgctgccggccgccgagatggtgctggtccgcctagcctac
gccgccgacctgccgacccccgacgaggcgatccggcagctgcgcgacggtctcggcgcg
ccgcagcccggtcccgggccctccgccggcggtgggggcagtggcgggggtggtgcgcag
gcgcagggccgcgtcctgccgacgctcgccgcctcgtcgccgcggccgacggcgcgcgcg
ctgccagctcgtgagccggccgccctcgtggtcgcctccttcgaggacgcgatccgcctc
gccgagcgcaaccgcgacgtcggcctcaagttcgcgctggagcgccacgtccgcctcgtc
cgtttcgaggacggccgcatcgagttcaacccggtgccgggcgccaaccccggcctcgcc
ggcgagatcggccgcaagctgtcgctgtggacgaaccggcgctggatcgtcgcggtgtcc
ggcgagaccggcgcgccgacggtcgccgagacgcgcgaggcgaccaggagccgcctcgtc
gacgacgcccgcgccgatccgaccgtcgccgcgatcctcgcgcgctttcccggcgccgag
atcgtcgacgtccagttccccgacgccgcgggcggcaccggagccgccgacggcggcttc
gacgacctcggcgacgcaccgctgcccgacctcgacggctacgagctcgtcgaagagttc
ggcgacttcgacgactga
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