Pleomorphomonas sp. SM30: OHA_1_03102
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Entry
OHA_1_03102 CDS
T05766
Symbol
rppH_2
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OHA_1_03102 (rppH_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pleo03019
]
OHA_1_03102 (rppH_2)
Messenger RNA biogenesis [BR:
pleo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OHA_1_03102 (rppH_2)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
DUF4945
RHH_9
Motif
Other DBs
NCBI-ProteinID:
BBE73489
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All DBs
Position
1:complement(3397644..3398150)
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AA seq
168 aa
AA seq
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MSHDRDDLPYRPCVGVMLFNAAGLVFVGNRRDRAGDGDDAWQMPQGGLDDGEDPLTAARR
ELAEETNVTSAALIAEAPDWYSYDVPDDLASGRFRRKWRGQTQKWFAMRFTGDDAEIDIE
RPLGGAHPPEFDAWRWERLDRLAGLIVPFKRPVYEKVCAAFAHLAATP
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaccgcgacgacctgccctaccgcccctgtgtcggcgtcatgctcttcaac
gccgccggcctcgtcttcgtcggcaaccgccgcgaccgtgccggcgacggcgacgatgct
tggcagatgccgcagggcggtctcgacgacggcgaggatccgctgacggcggcccgccgc
gagctcgccgaggagaccaacgtcacctccgcggcgctgatcgccgaagcgccggactgg
tattcctacgacgtgccggacgacctcgcctcgggccgcttcaggcgcaagtggcgcggc
cagacccagaagtggttcgcgatgcgcttcaccggcgacgacgccgagatcgacatcgag
cgcccgctcggcggcgcccatccgcccgagttcgacgcgtggcgctgggagcggctcgac
cgcctcgccggcctgatcgtaccgttcaagcggccggtctacgagaaggtctgcgccgcc
ttcgcccatctggcggcgacgccgtga
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