Pleomorphomonas sp. SM30: OHA_1_03347
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Entry
OHA_1_03347 CDS
T05766
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pleo03016
]
OHA_1_03347 (truB)
Enzymes [BR:
pleo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OHA_1_03347 (truB)
Transfer RNA biogenesis [BR:
pleo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OHA_1_03347 (truB)
Prokaryotic type
OHA_1_03347 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BBE73731
LinkDB
All DBs
Position
1:complement(3646816..3647859)
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AA seq
347 aa
AA seq
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MPARLGYERRLPGRAGAVRPSTAVPRVRIPPGVSGVSADMARRQKNNFVHGWVLLDKPVG
ITSTQAVGAIKRLFGTSKAGHAGTLDPLASGMLPIALGEATKTVPFVQDGRKIYRFTVRW
GVETTTDDTEGETVATSDVRPSADAVDAVLDEFEGEIEQVPPAFSAIKVDGERAYDLARA
GEEVVLDARPVTIHTIDLVATPDADTAVFECECGKGTYVRALARDIGRRLGTRGHVVDLR
RLVVGPYGEVDMIPLEKLQELAHEAGRDGLFAAALRPVETALDDIPALAVTEAEAGRLRS
GQPILLRGQGAPIDGPAYATRKGELVALGEIEQGQLHPRRVFNLATA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcctcggctatgagcggcgccttccggggcgcgcgggtgccgtgcgcccg
tccaccgccgtcccgcgggtccgaatcccgcccggcgtctccggggtttccgccgacatg
gcccgcaggcagaagaacaatttcgtccacggctgggtgctcctcgacaagccggtgggc
atcacgtccacccaggcggtcggggcgatcaagcggctgttcggcacctccaaggccggc
cacgccggcacgctcgacccgctcgcctccggcatgctgccgatcgcgctcggcgaggcg
acgaagaccgtccccttcgtccaggacggccgcaagatctaccgcttcaccgtgcgctgg
ggcgtcgagaccacgaccgacgacaccgagggcgagacggtcgcgacgtccgacgtccgc
ccgtccgccgacgcggtcgacgccgtgctcgacgagttcgagggcgagatcgagcaggtc
ccgccggccttctcggcgatcaaggtcgacggcgagcgcgcctacgacctcgcccgcgcc
ggcgaggaggtggtgctcgacgcccgcccggtcaccatccacacgatcgacctcgtcgcg
accccggacgccgacaccgccgtgttcgagtgcgaatgcggcaagggcacctacgtgcgc
gccctcgcccgtgacatcggccgccgcctcggcacccgcggccacgtggtggacctgcgc
cggctcgtcgtcggaccctacggcgaagtggacatgattccgcttgaaaagctgcaggaa
ctggcgcatgaagccggccgcgacggccttttcgccgccgcgctccgccccgtcgagacc
gcgctggacgacatcccggccctggccgtgacggaagcggaagcgggtcgcctgcgctcc
ggccagccgatcctcctgcgtgggcagggcgcccccatcgacggaccggcctacgccacc
cgcaagggcgagctcgtggcgctcggcgagatcgagcaagggcagctgcatccgcgcagg
gtcttcaacctcgccacggcctga
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