Pleomorphomonas sp. SM30: OHA_1_03355
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Entry
OHA_1_03355 CDS
T05766
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pleo03021
]
OHA_1_03355
03009 Ribosome biogenesis [BR:
pleo03009
]
OHA_1_03355
Transcription machinery [BR:
pleo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
OHA_1_03355
Ribosome biogenesis [BR:
pleo03009
]
Prokaryotic type
rRNA transcription factors
OHA_1_03355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_1
KH_NusA_C
E2F_CC-MB
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BBE73739
LinkDB
All DBs
Position
1:complement(3655541..3657157)
Genome browser
AA seq
538 aa
AA seq
DB search
MAVSANRLELLQIADAVAREKSIDRQIVITAMEDAIQKAARSRYGSETDVRAEINPRTGE
IRLQRLLQVVERVENSSTEIDLVDARHRNPAARLGDFIAEPLPPIDFGRIAAQSAKQVIV
QKVREAERDRQFDEFKDRMGEVVNGVVKRVEYGNVIVDLGRGEAICRRDELIPRESFRYG
DRIRALIFDVRREQRGPQVFLSRTHPTFMAKLFAQEVPEIYDGIIEVKAVARDPGSRAKI
AVISKDSSIDPVGACVGMRGSRVQAVVQELQGEKIDIIPWSPDAATFIVNALQPAEVSKV
VLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWAIDIMTEAEESERRQKEFNERT
QLFMEALNVDEVVGQLLATEGFATVEELAFVDRDEIASIEGFDDDTAEEIQARAQEFLDA
KERELDEERVRMGVSDDLRQVAGVTTAMMVALGKDGLLSVEDLAGCAADDLVGWTERKGG
EVTRHKGTFSELDVSRADAEAIIMAARVVAGWIEAPAEEAPEDEGEGGETEGEEVAEA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcagtgcgaaccgactcgaactcctgcagatcgccgacgcggtcgcgcgcgag
aagtcgatcgaccgccagatcgtgatcaccgcgatggaggacgccatccagaaggcggcc
cgctcgcgctacggctccgagaccgacgtccgcgccgagatcaacccgcgcaccggcgag
atccggctgcagcgcctcctgcaggtggtcgagcgcgtcgagaattcctcgaccgagatc
gacctcgtcgacgcccgccaccgcaacccggccgcccgcctcggcgacttcatcgccgag
ccgctgccgccgatcgacttcggccgcatcgccgcccagtcggccaagcaggtcatcgtg
cagaaggtgcgcgaggccgagcgcgaccgccagttcgacgagttcaaggaccgcatgggc
gaggtcgtcaatggcgtcgtcaagcgcgtcgaatacggcaacgtcatcgtcgacctcggc
cgcggcgaggcgatctgccggcgcgacgaactgatcccgcgcgagagcttccgctacggc
gaccgcatccgcgcgctgatcttcgacgtccgccgcgagcagcgcgggccgcaggtgttc
ctgtcgcgcacccacccgaccttcatggccaagctgttcgcccaggaggtccccgagatc
tacgacggcatcatcgaggtgaaggccgtcgcccgcgaccccggttcgcgcgccaagatc
gccgtgatctccaaggactcctcgatcgacccggtcggcgcctgcgtcggcatgcgcggc
agccgcgtccaggcggtggtgcaggagctccagggcgagaagatcgacatcatcccctgg
tcgcccgacgcggccactttcatcgtcaacgcgctgcagccggccgaggtgtcgaaggtg
gtgctcgacgaggacgccgagcgcatcgaggtcgtcgtccccgacgagcagctgtcgctg
gcgatcggccgccgcggccagaacgtccgcctcgccagccagctgaccggctgggccatc
gacatcatgaccgaggccgaggagagcgagcggcgccagaaggagttcaacgagcgcacc
cagctcttcatggaggcgctcaatgtcgacgaggtggtcggccagctgctcgccaccgag
ggcttcgccaccgtcgaggagctcgccttcgtcgaccgcgacgagatcgcctcgatcgag
ggcttcgacgacgacaccgccgaggagatccaggcccgcgcccaggagttcctcgacgcc
aaggagcgcgagctcgacgaggagcgcgtccgcatgggcgtctccgacgacctgcgtcag
gtcgccggcgtcaccaccgcgatgatggtcgccctcggcaaggacggcctgctctccgtc
gaggacctcgccggctgcgccgccgacgacctcgtcggctggaccgagcgcaagggcggc
gaggtcacgcgccacaagggcaccttctccgagctcgacgtttcccgcgccgacgccgag
gcgatcatcatggccgcgcgcgtcgtcgccggctggatcgaggcccccgccgaggaagcg
cccgaggacgagggcgagggcggcgagaccgagggcgaggaggtggccgaggcctga
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