Pleomorphomonas sp. SM30: OHA_1_03568
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Entry
OHA_1_03568 CDS
T05766
Symbol
ydcR_2
Name
(GenBank) putative HTH-type transcriptional regulator YdcR
Organism
pleo
Pleomorphomonas sp. SM30
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GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Beta_elim_lyase
HTH_24
Cys_Met_Meta_PP
LexA_DNA_bind
HTH_Crp_2
HTH_36
HTH_41
HTH_29
MarR_2
HTH_50
NirdL-like_HTH
Rrf2
MarR
HTH_11
Fe_dep_repress
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BBE73942
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Position
1:3912407..3913825
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AA seq
472 aa
AA seq
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MDLGVGPRTAEAMAAIRARISGGGLGPGDRLPSIRRLAATLGLSPSTVVEAYDRLAAEGV
IRARPGSGFYVVPGVRPPLAFAPAVGRPPAVDPFWVSRLALDADPAMAKPGCGWLPADWM
PTEALRRAIRTVARSDAALLTDYGGTRGSPALRRLLANRLADEGVPVGPDRILLTASGTQ
AIDLVCRMLLRPGDTVILDDPCYFNFQALLGVHGVRTVGVPFGETGPDVAAFEATVAAER
PRLYLTNAALHNPTGATMAPQTAHRVLAAAAAHDVVVVEDDIFADFEPDRSVRLAALDGL
DRVVRVGSFSKTLSASVRCGYVAARADWIEALVDLQVATGFGGPSPVAAEVVARLLAEGG
YRRHVEGLRRRLDGARRDAARQLGDLGMEPWTMPRGGFYLWCRLPDGRDGATVARAALGE
GVVLAPGDVFAVSGSAAAFMRFNVAWARDARALDVLRRALDGPAEEGAAPDG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatctcggggtggggccgcgtacggcggaggcgatggcggccatccgggcgcgcatc
tccggtggcgggctcgggccgggcgaccggctgccgtcgatccgtcggctcgccgcgacg
ctcggcctgtcgccgtcgacggtggtggaggcctacgatcgtctcgccgccgagggtgtc
attcgcgcgcggcccggttccggcttctacgtcgttcccggcgtgcgcccaccgctcgcg
ttcgcaccggcggtcgggcgaccgccggcggtcgatccgttctgggtctcccggctcgcc
ctcgacgccgatcccgccatggccaagcccggctgcggctggctgcccgccgactggatg
ccgacggaagcgctgcgccgcgccatccgcaccgtggcgcgatccgacgcggcgctcctg
accgactacggcggcacgcgcggctccccggcgctgcgccggctgctcgccaaccggctc
gccgacgagggtgttccggtcggccccgaccgcatcctcctgaccgcgtcggggacgcag
gcgatcgacctcgtctgccgaatgctgctccggcccggcgatacggtgatcctcgacgat
ccctgctacttcaacttccaggccctgctcggcgtccacggggtccgcacggtcggcgtg
cccttcggcgagacgggccccgacgtcgccgccttcgaggcgacggtcgccgccgaacga
ccgcgtctctacttgaccaatgccgccctccacaacccgaccggtgcgacgatggcgccg
cagaccgcgcaccgggttctcgcagccgccgccgcccacgacgtcgtggtcgtcgaggac
gacatcttcgccgacttcgagccggatcgctcggtgcgtctcgccgccctcgacggcctc
gatcgggtcgtgcgcgtcggcagtttctccaagaccctgtcggcgtcggtgcgctgcggc
tacgttgccgcgcgggccgactggatcgaggcactggtcgacctccaggtcgccaccggc
ttcggcgggccgagcccggtcgcagcggaggtggtggcccgcctgctcgccgaaggcggc
tatcgccggcacgtggaagggctgcgtcgacggctcgacggtgcccgccgtgacgcggcg
cggcaactcggagatctcggcatggagccatggacgatgccgcgcggcggcttctacctc
tggtgccgcttgccggacgggcgggacggcgccacagtcgcccgtgcggcgctcggcgag
ggtgtggtgctcgcgcccggcgacgtcttcgcggtgtccgggtccgccgcggcgttcatg
cgcttcaacgtggcgtgggcacgcgacgcccgcgcgctcgacgttctgcgccgcgctctc
gacggccccgcggaggagggggccgccccggacggatga
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