Pleomorphomonas sp. SM30: OHA_1_03742
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Entry
OHA_1_03742 CDS
T05766
Name
(GenBank) putative HTH-type transcriptional regulator/MT2039
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleo03000
]
OHA_1_03742
03036 Chromosome and associated proteins [BR:
pleo03036
]
OHA_1_03742
Transcription factors [BR:
pleo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OHA_1_03742
Chromosome and associated proteins [BR:
pleo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
OHA_1_03742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
BBE74114
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All DBs
Position
1:4104361..4105299
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AA seq
312 aa
AA seq
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MIDYPAAAAVAAVIREGSFERAAAALAITPSAVSQRVRGLEERLGAILVVRGQPCRATEL
GRALVGHLDRVRLMEADLAPALGARAAGEAPPTLRVAVNADSLATWFPAAAAAFGRAAAA
TLDLTLDDEGHTAERLRGGEVVAAVTADAGPVPGCRTLPLGTLRYAACAAPDFAARHFPA
GATAEAMASAPQLRFDRRDDLQARWAAAAVGVAPTGPVHWVPSTHAFLDLALAGLAWGMQ
PAALAAPHLAAGRLVDIAPGRSLDVDLHWTVARLPAASLRALTAAVTTAARRALMPPGGG
GADAVAGRRERP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactatcccgccgccgccgccgtcgccgccgtgatccgcgagggcagtttcgag
cgcgccgccgcggcgctcgccatcacgccctcggcggtgtcgcagcgcgtccgcggcctc
gaggagcgcctcggcgccatcctggtggtgcgcggccagccctgccgggcgaccgagctc
ggccgcgccctggtcggccatctcgaccgcgtccgcctgatggaagccgacctcgcgccc
gcgctcggcgcccgcgccgccggcgaggcgccgccgacgctcagggtcgcggtcaatgcc
gacagcctcgcgacctggttccccgcggccgccgccgccttcgggcgtgccgcggcggcg
acgctcgacctgacgctcgacgacgagggccacaccgccgagcggctgcgcggcggcgag
gtggtcgccgcggtcaccgccgatgccgggccggtgccgggctgccgtacgctgccgctc
ggcacgctgcgctacgccgcctgcgccgccccggacttcgccgcccgccacttccccgcc
ggcgccaccgccgaggcgatggcgtcggcgccgcagctgcggttcgaccgccgcgacgat
ctccaggcgcgctgggccgccgccgccgtcggcgtggcgccgaccggtccggtgcactgg
gtgccctccacccacgccttcctcgacctcgcgctcgccggcctcgcctggggcatgcag
ccggctgcgctcgccgcgccgcatctcgccgccggccgcctcgtcgacatcgcgcccggc
cgctcgctcgacgtcgatctgcactggaccgtcgcgcgcctcccggcggcctcgctgcgg
gcgctcaccgcggccgtcacgacggcggcgcggcgcgcgctgatgccgccgggcggcggg
ggcgcggatgcggttgccggccggcgcgaacgaccctag
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