Pleomorphomonas sp. SM30: OHA_1_03927
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Entry
OHA_1_03927 CDS
T05766
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein precursor
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pleo
Pleomorphomonas sp. SM30
Pathway
pleo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OHA_1_03927 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pleo02000
]
OHA_1_03927 (xylF)
Transporters [BR:
pleo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
OHA_1_03927 (xylF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DHQS
PapD_C
Motif
Other DBs
NCBI-ProteinID:
BBE74297
LinkDB
All DBs
Position
1:complement(4293014..4294057)
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AA seq
347 aa
AA seq
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MVRIRSVVAAALLSAASLVTVAQAEGLKVGVSWSNFQEERWKTDEAAIKAALEAAGAEYI
SADAQSSPAKQLTDVESLISQGANALIILAQDTDAITPAVEKAVAEGIPVVGYDRLIENP
AAYYITFDNKEVGRIQAREVFKVKPEGNYAFIKGASTDPNADFLFSGQMEVLKEAMDAGK
IKNVGEAYTDQWLPANAQKNMEQILTANDNKVDAVVASNDGTAGGVVAALAAQGLAGSVP
VSGQDGDQAALNRVALGTQTVSVWKDARELGKKAGEIAVALAGGTAMDKVDGTVKFSGGP
KGAEMNATFLTPVAITKDNLNVVIDAGWVSKDVVCQGVAAGSVAACN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggattcgttccgtcgtcgccgccgcgctgctgtcggcggcttcgctggtcacc
gtcgcgcaggccgagggcctcaaggtcggcgtcagctggtcgaacttccaggaagagcgc
tggaagaccgacgaggccgcgatcaaggccgcgctcgaggccgccggcgccgagtacatc
tccgccgacgcccagtcgtcgccggccaagcagctgaccgacgtcgagagcctgatctcg
cagggtgccaacgccctgatcatcctggcccaggacaccgacgccatcaccccggcggtc
gagaaggccgtggccgagggcatcccggtggtcggctacgaccgcctgatcgagaacccg
gccgcctactacatcaccttcgacaacaaggaagtgggccgcatccaggctcgcgaggtg
ttcaaggtcaagcccgagggcaactacgccttcatcaagggcgcttccaccgacccgaac
gccgacttcctgttctcgggccagatggaggtcctgaaggaggcgatggacgccggcaag
atcaagaacgtcggcgaggcctacaccgaccagtggctgccggccaacgcccagaagaac
atggagcagatcctcaccgccaacgacaacaaggtcgacgcggtggtggcctccaacgac
ggcacggccggcggcgtcgtcgccgcgctcgcggcccagggtctcgccggttccgtgccg
gtctccggccaggacggcgaccaggcggcgctgaaccgcgtcgcgctcggcacccagacc
gtgtcggtctggaaggacgcccgcgaactcggcaagaaggcgggcgagatcgccgtcgcc
ctcgccggcggcaccgcgatggacaaggtcgacggtacggtgaagttctcgggcggcccg
aagggcgccgagatgaacgccaccttcctgaccccggtcgccatcaccaaggacaacctc
aacgtcgtcatcgacgccggctgggtgtccaaggacgtggtctgccagggcgtcgcggcc
ggttcggtcgccgcctgcaactga
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