Pleomorphomonas sp. SM30: OHA_1_03954
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Entry
OHA_1_03954 CDS
T05766
Symbol
pdhS
Name
(GenBank) cell-division control histidine kinase PdhS
Organism
pleo
Pleomorphomonas sp. SM30
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_9
PAS_4
HATPase_c_2
PAS_7
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
BBE74324
LinkDB
All DBs
Position
1:complement(4325723..4330855)
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AA seq
1710 aa
AA seq
DB search
MADRADSFIAAAADPQLAALAADPRPAVLFDRGGTRILWANGAGAAYLGVSDPAALARRG
FAAESAPARRIATLARQLSGTEERTERLALPKGLLPQPVVCRARRVALGIERHVLLVVGD
GTGRLDPATAARRYEALTAAARLAAAPAVTELSADIAGVAVPEDAPAVPAVPAPAPREAV
ADAAGETIPEDAPDEGETAPGTAADATPELAAREAAVEPAEVATASTASDVADAVPVPAE
RAESAPGAVATKAAASAPAAIAVAAPSASEVPAAASVSDPADATVDAAFTEPVADADADA
DGMSTVAAESDIAAGIGERPDPTVSNPTASLPEADAAIEPTPAEAVVTTGDDADAETDTG
APIEAASESDAAVEAPVTDDAAPATPAEPTFKAPTHGRAVRFVFELDDALAFRFVSDDLA
ATVGPRAADLAGRRWPDVARDFGLDPLGRVATALGRRDTFTGLTVDWPVQDAAARVPVDL
AGMPVFGRDRAFKGYRGFGIAKCGALFAAPVAVTAVLATAALATAAATTADTSTDDAPTA
NGTDLPAAEAPALVEEPAVETVDTPVVPQIADVPTDLGAGSDEAAAEEADDAASPPCEPS
DLPAAEAPALVEDSETVEIVHAPGDAPGVDVPPEEVVDDLGGAAFRDDADTPDAPPPPAP
PTPPAEQPSPPRPDEAPAGPSTPSVEPAAPEVPPAPPPEAPAPAPSAPDTAPGAPEEVPA
DLPEEVPAGVPDEAPLERPDEVAPPVVEETGAPLPDEMPAPVMPSEFAAPSRVDAEAPTP
DETVAPMAPAAFAAQDHLGTAPAGSATETGPEAGADDMPVPMGAAREVGEIPAPALAAIG
VESPLAGIGTRTADATAVATAPTSTAEPQTIADPGETTKADNSEGAPSDTPSGSTAAEIV
AVEAVPAPNADEAVAETAERVADAVETVGEAPALADHADLSTTAELPAAGTATDSVEALA
GETGGTEAEADVDEPAAPGVDAIEIADAHTSGPAVVEAKPEQVNELAAAAVPLAPEEAVA
DARSDEAPVTIGADVPAATEAPAEVAAEVAEIASAPPVQPAIAEMIPAAVADAAPTALLG
DAPAEAPTLVEATATPDDAATDSPSEPAAEPVIAALSTDAIDEADAPATDEPDDDAPVVD
GVEADVAWSERTTAEVIPSPIVPRAVPKPFYSDAEAERRQLSRPEREAFQKIAEALGARL
EGGGPLAPAGALPEDAEASAAAVPTVPVPPAPAGVDCALLDRLPIAIALLKDGEALFVNR
AFLALTGYDSAAALADAGGISAAFAGSALPRDASLPALRRRDGVEIAVAARLHSVPVDGG
AASMLVIQETAAATGATRAASAEARAEELEAILDTATDGVLVLDPKGVVVGANRSAEALF
GTERSAMVGEPLVSLLAPESHRAAIDYLDGLSRNGLSSVLNDGREVIGRVRGGGLVPLFM
TVGRVSATRFCAVLRDITQWKRAEEELTNAKRAAETASSQKSEFLAKISHEIRTPLNAII
GFSEVMMEERFGPVGSERYKEYLRDIHLSGAHIMSLVNDLLDLSKIEAGKLDLSFEAVAP
NDVIRECVALMQPQANRERIIIRTSLSSSLPAVVADSRSLRQIVLNLLSNAIKFNTPGGQ
VIVSTLYEVTGEVALRVRDTGPGMSEDDIAKALEPFRQLQTTRPGRGTGLGLPLTKALVE
ANRASFRIDSTVGQGTLVQVTFPSTRVLAE
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcgggccgacagctttatcgcggcggcggcggatccgcagctcgcggcgctc
gccgccgatccgcggccggccgttctgttcgatcgcggcggcacccggatcctgtgggcc
aacggcgccggcgccgcttatctcggcgtctccgacccggctgcgctcgcccgtcgcggc
ttcgccgcggagagcgcccccgcgcgccgcatcgccaccctcgcccgccagctgtccggc
accgaggagcgcaccgaacgcctcgccctgccgaagggcctcttgccccagccggtggtc
tgccgcgcccgccgcgtcgccctcggcatcgagcgccacgtgctgctggtggtcggcgac
ggcaccggccggctcgacccggcgacggccgcgcggcgctacgaggcgctgaccgcggcg
gcccggctcgccgcggcgccggccgtgaccgaactctccgccgacatcgccggcgtggcc
gttcccgaggacgccccggccgtgccggccgtgcctgcccccgcgccgcgcgaggccgtc
gcggacgccgccggcgagaccatcccggaggacgcgccggacgagggcgagaccgcgccc
gggacggcagcggacgccacgcccgaactcgccgctcgcgaggcggccgtggagcccgcc
gaagtcgcgaccgcctcgaccgcgtccgacgtcgccgacgctgttccggtgccggccgaa
cgcgcggagtccgcacccggtgcggtcgcgacgaaggcagcggcatcggcccccgcggcg
atcgccgtcgcagccccatccgcgtcagaagtccctgcggcagcaagcgtctcggacccg
gccgacgcgacggtggacgccgccttcaccgagcccgtcgccgacgccgacgccgacgct
gacggtatgtcgacggttgctgcggaatcggacatcgctgccgggatcggcgagcggccg
gacccgacagtgtcgaaccccaccgcttccctgccggaggccgacgccgccatcgaaccc
acccccgccgaggcggtcgtgacgaccggcgacgacgccgacgccgaaaccgacaccggc
gcgccgatcgaggccgcgtcggagagcgacgcggccgtcgaagccccggtgaccgacgac
gccgcgcccgccaccccggccgaaccgaccttcaaggcgccgacccacggccgcgccgtc
cgcttcgtgttcgagctcgacgacgccctcgccttccgcttcgtctcggacgacctcgcg
gccaccgtcggccctcgcgctgccgacctcgcgggccgacggtggccggacgtcgcccgc
gatttcgggctcgatccgctcggccgggtcgccacggcgctcggccggcgcgacaccttc
accggcctgacggtggactggccggtgcaggacgccgccgcgcgcgtgccggtcgacctc
gcgggcatgccggtgttcggccgcgaccgcgccttcaagggctaccgcggtttcggcatc
gccaagtgcggcgcgctgttcgcggcgcccgtcgcggtgacggcggtgctggcgacggcc
gcactcgcgaccgccgccgccacgaccgccgatacctcgaccgacgacgcgccgacggcg
aacggcaccgatctgcccgcggccgaggcgccggcgctggtcgaagagcccgcggtcgag
accgtcgacacgccggtggtgccgcagatcgccgacgtcccgaccgacctcggcgccggc
tcggacgaggccgcggccgaagaggcagacgacgcggcgtcgccgccctgcgagccgagc
gacctgcccgcggccgaagcccccgctctggtcgaggactccgagaccgtcgaaatcgtg
cacgcccccggcgacgcgcccggtgtcgacgtgccgcccgaagaagtggtggacgatctc
ggcggcgccgccttccgcgacgacgccgacacgccggacgccccgccgccgcccgcgcca
ccgaccccgcccgccgaacagccgtcgccgccccgtcccgacgaggcgccggcgggcccg
tcgacgccgtcggtcgagccggccgcgcccgaggtgccgcccgcgccgccgccggaagcg
cccgcgccggcgccgtccgcccccgacacggctcccggtgcgcccgaggaagtccctgcg
gatctgccggaggaggtcccggccggtgtgccggacgaggccccgctcgagcgcccggac
gaggtcgcgccgccggtcgtcgaggaaaccggcgcgccgctgccggacgagatgcccgcg
ccggtgatgccgtcggagttcgccgcgccgagccgcgtggacgccgaggcgccgacgccg
gacgagacggtcgcgccgatggcacccgccgcgttcgccgcgcaggaccacttgggcacc
gcgcccgcgggttcggcgaccgagacgggccccgaggccggggccgacgacatgccggtg
ccgatgggcgccgcccgcgaggtcggcgagattcccgcgccggcccttgctgcgatcggc
gtcgagtcgcccctcgccgggatcggcacgcggaccgcggacgcgaccgccgtcgcaacc
gcgccgacatcgactgccgagccgcagacgatcgccgacccaggcgagacaaccaaggcc
gataactccgaaggcgcaccatcggacaccccgtccggaagcacggccgcggagatcgtc
gccgtcgaggcggttccggctcccaacgccgacgaagccgtggcggagaccgccgaacgc
gtcgcggacgcggtcgagaccgtcggcgaagcgccggccttggccgaccacgcggacctg
tccacgacggccgagcttcccgccgccgggacggccactgactcggtggaggccctggca
ggggagaccggcggaaccgaggcggaggccgacgtcgacgagcccgcggctcccggcgtc
gacgccatcgagatcgccgatgcgcatacgtccgggcccgccgtcgtcgaggcgaagccg
gaacaggtgaacgagttggccgccgcggccgtgccgcttgcccccgaagaggcggtggcc
gacgcccgctcggacgaggcacccgtcacgataggcgcggatgtgcccgccgccacggag
gctccggccgaggtcgctgcagaggtcgccgagatcgcgtccgcccctccggtccaaccg
gcgatcgccgagatgatcccggcggccgttgccgatgccgcccccaccgcactcttgggg
gacgcgcccgccgaggctcccacgctcgtcgaggcgaccgctacccccgacgacgccgca
accgacagcccgtccgagcccgcggccgaaccggtcattgccgcgctctcgaccgatgca
atcgacgaggccgacgctccggccaccgacgagcccgacgacgacgccccggtggtcgac
ggcgtcgaggcggacgtcgcgtggagcgagcggacgacggccgaggtgatcccctccccg
atcgtgccgcgcgcggtgccgaagccattctactccgacgccgaggcggagcgtcgccag
ctgtcgcggcctgagcgcgaggcgttccagaagatcgccgaggcgctcggcgcgcggctc
gagggcggtggaccgctcgccccggccggcgccctgcccgaagacgccgaggcatctgcc
gcggccgtccccaccgtcccggtgccgccggcgccggccggggtcgactgcgccctgctc
gaccggctcccgatcgcgatcgcgctgctgaaggacggcgaggcgctgttcgtcaaccgc
gccttcctcgccctcaccggctacgacagcgccgcggcgctcgcggacgccggcggcatc
tccgcggccttcgcgggttccgcgctgccgcgcgacgcctcgcttccggccctgcgccgg
cgcgacggcgtcgagatcgcggtcgccgcccggctgcactcggtgccggtcgacggcggc
gccgcctcgatgctcgtcatccaggagaccgcggccgccaccggcgcgacccgggccgcc
agcgccgaggcgcgtgccgaggagctcgaggccatcctcgacaccgccaccgacggcgtc
cttgtgctcgaccccaagggcgtggtggtcggcgccaaccgttcggccgaggcgctgttc
ggcaccgagcggtcggcgatggtcggcgagccgctggtctcgctgctcgcccccgagagc
caccgcgccgccatcgactatctcgacggcctgtcgcgcaacggtctctccagcgtgctc
aacgacggccgcgaggtgatcggccgggtccgcggcggcgggctggtgccgctgttcatg
acggtgggccgcgtctcggcgacgcgcttctgcgcggtgctgcgcgacatcacccagtgg
aagcgcgccgaagaggagctgaccaacgccaagcgcgccgccgagacggcgtcgtcgcag
aagtcggagttcctggccaagatcagccacgagatccgcacgccgctcaacgccatcatc
ggcttctccgaggtgatgatggaggagcgcttcggcccggtcggcagcgagcgctacaag
gaatacctgcgcgacatccacctgtccggggctcacatcatgagcctcgtcaacgatctg
ctcgacctctccaagatcgaggccggcaagctcgacctctccttcgaggcggtggcgccg
aacgacgtcatccgcgaatgcgtcgcgctgatgcagccgcaggccaaccgcgagcgcatc
atcatccgcacgtcgctgtcgtcgagcctgccggcggtggtcgccgacagccgcagcctg
cgccagatcgtcctgaacctcctgtccaacgccatcaagttcaacacgcccggcggtcag
gtgatcgtctcgacgctctacgaggtcaccggcgaggtggcgctgcgcgtacgcgacacc
ggcccgggcatgagcgaggacgacatcgccaaggcgctggaaccgttccgccagctccag
accacccgccccggccgcggcaccggcctcggcctgccgctgaccaaggcgctggtcgag
gccaaccgcgcgagcttccggatcgactccaccgtcggccagggcacgctggtccaggtc
accttcccctcgacgcgggtgctggcggagtag
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