Pleomorphomonas sp. SM30: OHA_1_04383
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Entry
OHA_1_04383 CDS
T05766
Name
(GenBank) apolipoprotein A1/A4/E domain protein
Organism
pleo
Pleomorphomonas sp. SM30
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
ApoLp-III
CoV_S2
Motif
Other DBs
NCBI-ProteinID:
BBE74746
LinkDB
All DBs
Position
1:complement(4778244..4785500)
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AA seq
2418 aa
AA seq
DB search
MAKNTTVKDPAEAALSAVEEALKIDFGNLDPAPGSTDADLFGDTPAPAPEPAKPAAAAAP
AAAPEPAPEPAEAARPAIARPRAPANDDRRSVSTVLYQLQRRPSKAPFVVAFVASAVWAA
AGAWIGSRSLAAPAGVQDVSAFLARPDTLMLAGAVVAPILFFWAFAVMVWRAQDMRIAAR
SLTEVAVRLAEPEQVAKENVVTVGQAIRREVAAMGDGIERALARASELEVLVHNEVASLE
RSYTENEIRIRSLIEELVTQREAVVTNAERVRTTIAGAHQGLAEELRSAGEDLTGRIEDT
GRSVTRTLGDKAEELTRLFDTSGATLADLVAKRGEDYVARLETTGREVSERLTTDTAAFN
TRLSEAGRSITDTLAVQSASLLASLAEQRETFTAKLDETGTGVAAAVTAKVDALTGTLSR
EGERLTSAVAAQTTALDDILGTRSREMATTLEARAAELSSTIAGQTGDLAFTLAQRTEEL
IETLGARTGEIDAILNTRTVELTAGLAARVGELDGALSSRSAEIAAAVTAGTSGLAETLA
ARTAEITAAVAAGTRALDDGVAARTAEFTATLGTRTGEIVGAIAAGTEALDAGVAARTAA
FTAALEARTGEIVGAIATGTETLETNVATRVRALESTLATQTEALGATLDRRAAALDAAL
ADRAAALDGTVSARTEALVSTITGLTGELAGTLAERAGVLEDTLAGGSAALAGALETRTR
ELGEDLAGRALSIERLLTDQTNAIVVSFDTRAAVLEQALDTRTREMDETLARTAGQVETA
IVERTRGAIEMLEHTGTRFADDIATRAAELTAAVDRSGADVGAAIATRVDEIAGALRSTG
ESVLLDLAIRSGEITDRLDETGTRITDEIATRGTDLVNRLTRTGEDVHQAISVGGGSLAD
RLSETGGDIARLLDDRTGEIRRIVDGATRTVETVLSVGGGDFTERLATIGGEIARAIGAR
GERLAESLTVTGNRIAGLLDDRSDSLTTSFEARIAALDEIVNGRAKALVDSLLDRTTEID
GTLEGRIRAIEEALAARTAAIQAALGTGTAAIEAALAGRVDGLAGLIDQRVAALGSTIDG
RSAAFVGALDERTGAFVGTLDSRTGAIVESFDDRTKSILSSIENRAEILSTALAGQLETF
DRTVGTRLDDAATSIAAKADTLSETLDKRTMMIDQALDTRARQITETLVARTRDLAQAFS
SGQSEMAEAIEGRLEVVAKSLQRKTEEFTETLADKVAEINVSLGAKVFEVAETLDNRSAD
LQRSLSERLGTIVGTLTGETETARETLARAILDAVDILERESARAREEMVGALAGATEKL
GSESERARALVDGALRDVSERIAAEAGRVRDVMTASADLVAGRLDSETARSRDTLAAAVE
ALAGKLVDETGRAREILSTMLDGVGDKLGSESERVRGLVVGAIDAAAARLAEESQRTAVV
LAATAEEAASRLAAERGDLQGAFVATLDATTDRLAAERVRTRDALAEAADETAARLAAER
DLTRAALAAATDETARRLADERERTHAALAATVDETAERLGAERLRTHEALTASVDETAD
RLAAERDRTRDILAGAVEDTAARLAAERDRTRVALVAAIDETADRLAGERERNREALIDG
ADGFAAAIAAERDRTRALLTELATSISSALTGESEKARAIVEATVADVAGRLGGESERVR
ATVVGTVEEVSGRLIAESEKARAALVASLDEATDRLSGESARVRSNIIGAAEDITWRLST
ESEKQASQLESAIDAATRRIQEASTLLESALLDRTAKAADELDVRSERLAALLTARLSEL
GELIDGRGGELARSFLSGTRSLTDIVDNRGDEIAAKVRGAANDVLAALADGGEGVSRAIA
ERGQETSRTLAATSRTLLSTLDEQGRSVVAALDSTNARVKDDVSSILDQLDRSNRALQTI
LEQAGGSLSRIERSLAQQTGDFRSVIDRVVDDTAESTRAIADNVGTLKSVSTDVLGEIAR
IAARFGEQTQAVQTAGSALAAAAGGFEGVVDERRGALERIAATLADKSGKVEDAMRGFSA
LIKDTLDTAERRARDVGMLLARSAETAATSVTEQIQSLGVTAELEGEKTKEAVERLRERL
VAEIDASIGGAVDRFAETAEEMRKATRAVSRELEEIREEIGRGVLDLPQETSQHAAAMRR
VVSEQIKALNELGEIAARHAASSEASGSRGRPSASSGGTAVLEAPRPAPRPQAPAAPERA
PVERPAAVERAPVERPQAERPSIEPYAFPAEPRRAEPQRPAEGGRERGWIADLLRRVAAD
EGREQEAPARGGEPRPVEPPRNAGHTIESLNSLSVDIARAIDNEAFVDLWNRYRRGETHV
FTRRLYTLQGQQTFDEIRRKYQRDGEFRAAVDRYIDHFRALYDDAVRKDPEGALALGYLN
SDTGKVYTMLAHASGKLG
NT seq
7257 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacaccacggtgaaggatccggcggaagcggccctctcggccgtcgaggag
gcgctgaagatcgacttcggcaacctcgatcccgccccgggatccaccgacgccgacctg
ttcggcgacacccccgcacccgctccggagcccgccaagcccgccgccgcggcggcgccg
gccgccgcgcccgaaccggccccggagccggccgaggcggcgcggcccgcgatcgcccgc
ccgcgcgcgccggccaacgacgaccgccgctcggtctcaaccgtgctctaccagctgcag
cgccgtccctcgaaggcccccttcgtggtcgccttcgtcgcctcggcggtctgggccgcc
gccggcgcctggatcggctcgcgcagcctcgccgcgcccgccggcgtccaggacgtctcg
gccttcctcgcccgtccggacacgctgatgctggccggcgccgtggtggcgccgatcctg
ttcttctgggccttcgcggtgatggtctggcgggcgcaggacatgcgcatcgccgcccgt
tctctgaccgaggtcgccgtccgtctcgccgagccggagcaggtcgccaaggagaacgtc
gtcacggtcggccaggcgatccgccgcgaagtcgccgcgatgggcgacggcatcgagcgc
gccctcgcccgcgccagcgaactcgaggtgctggtccacaacgaggtcgcctcgctggag
cgctcctacaccgagaacgagatccgcatccgcagcctgatcgaggagctggtcacgcag
cgcgaggcggtcgtaaccaacgccgagcgcgtgcgcaccaccatcgccggcgcccaccag
ggcctcgccgaggagctgcgcagcgccggcgaggacctgaccggccgcatcgaggacacc
ggccgctcggtcacccgcacgctcggcgacaaggccgaggagctgacccgtctgttcgac
acctcgggtgcgacgctggccgacctcgtcgccaagcgcggcgaggactacgtcgcccgc
ctcgagaccaccggccgcgaggtctccgagcgcctgaccaccgacactgccgcgttcaac
acccgcctctccgaggccggccgcagcatcaccgacaccctcgccgtccagagcgccagc
ctgctcgcctccctggccgagcagcgcgagaccttcaccgccaagctcgacgagaccggc
accggcgtcgccgccgccgtcaccgccaaggtcgacgcgctcaccggcaccctctcccgc
gagggcgagcggctgacctcggcggtcgccgcgcagaccaccgccctcgacgacatcctc
ggcacccgctcgcgcgagatggcgaccacgctcgaggcccgcgccgccgagctgtcgtcg
accatcgcgggccagaccggcgacctcgccttcaccctcgcccagcgcaccgaggagttg
atcgagaccctcggcgcccgcaccggcgagatcgacgcgatcctgaacacccgaacggtc
gagctgaccgccggcctcgccgcccgcgtcggcgaactcgacggcgcgctgtcgagccgc
agcgccgagatcgcggccgccgtcaccgccggcacctccggcctcgccgagactctggcc
gcccgcaccgcggagatcaccgccgcggtcgctgccggcacccgcgcgctcgacgacggc
gtcgcggcccggaccgccgagttcaccgccaccctcgggacccgcacgggcgagatcgtc
ggcgccatcgccgccggcaccgaggcgctcgacgccggcgtcgccgcccgcaccgccgcc
ttcaccgcggccctcgaggcccgcaccggcgagatcgtcggcgccatcgcaaccggcacc
gagacgctcgagaccaacgtcgccacccgcgtccgcgcgctggaatcgaccctcgcgacg
cagaccgaggccctcggcgccaccctcgaccgtcgtgccgctgcgctcgacgccgccctc
gccgaccgcgccgcggccctcgacggcacggtgtcggcccgcaccgaggcgctggtctcg
acgatcaccggcctcaccggcgagctcgccggcaccctcgccgagcgcgccggcgtcctc
gaggacacgctcgccggcggcagcgccgccctcgccggcgccctcgagacccgcacccgc
gaactcggcgaggacctcgccggccgcgccctctcgatcgagcgcctgctcaccgaccag
accaacgcgatcgtggtgtccttcgatacccgcgccgccgtgctcgagcaggccctcgac
acccgcacccgcgagatggacgagacgctggcgcgcaccgccggtcaggtcgagaccgcc
atcgtcgagcgcacccgcggcgccatcgagatgctggagcacaccggcacccgcttcgcc
gacgacatcgccacccgcgccgccgaactgaccgcggcggtcgaccgctccggcgccgac
gtcggcgccgccatcgccacccgggtcgacgagatcgccggcgccctgcgctcgaccggc
gagtcggtcctgctcgacctcgccatccgcagcggcgagatcaccgaccgtctcgacgag
accggcacccgcatcaccgacgagatcgccacccgcggcaccgacctcgtcaaccgcctg
acccgcaccggcgaggacgtccatcaggcgatctccgtcggcggcggcagcctcgccgac
cgcctgtccgagaccggcggcgacatcgcccgtctgctcgacgaccgcaccggcgagatc
cgccgcatcgtcgacggcgccacccgcacggtcgagacggtgctgtcggtcggcggcggc
gacttcaccgagcgcctcgccaccatcggcggcgagatcgcccgcgcgatcggcgcccgc
ggcgagcgcctcgccgagagcctgaccgtcaccggcaaccgcatcgccggcctgctggac
gaccgctccgacagcctgaccaccagcttcgaggcgcgcatcgccgccctcgacgagatc
gtcaacggccgcgccaaggcgctggtcgacagcctgctcgaccgcaccaccgagatcgac
ggcacgctcgagggccgcatccgcgccatcgaggaggcgctcgccgcccgcaccgccgcc
atccaggctgccctcggcaccggcaccgccgcgatcgaggccgccctcgccggccgcgtc
gacggcctcgccggcctcatcgaccagcgcgtcgccgccctcggcagtaccatcgacggc
cgctcggccgccttcgtcggcgccctcgacgagcgcaccggcgccttcgtcggcaccctc
gacagccgcaccggcgcgatcgtcgaatccttcgacgaccgcaccaagtcgatcctgtcc
tcgatcgagaaccgcgcggagatcctctcgaccgccctcgccggccagctcgagaccttc
gaccgcaccgtcggcacccgcctcgacgacgccgcgaccagcatcgccgccaaggcggac
acgctgagcgagacgctcgacaagcgcaccatgatgatcgaccaggcgctcgacacccgc
gcccgtcagatcaccgagaccctggtcgcccgcacccgcgacctcgcccaggcgttctcc
tcgggccagtccgagatggccgaggccatcgagggccgcctcgaggtcgtcgccaagtcg
ttgcagcggaagaccgaggagttcaccgagacgctcgccgacaaggtcgccgagatcaac
gtctcgctgggcgccaaggtgttcgaggtcgccgagacgctcgacaaccgctccgccgac
ctgcagcgctcgctgtccgagcggctcggcaccatcgtcggcaccctcaccggcgagacc
gagacggcgcgcgagaccctcgcccgcgcgatcctcgacgcggtcgacatcctggagcgc
gagagcgcccgggcccgcgaggagatggtcggcgccctcgccggcgcgaccgagaagctc
ggctccgaatccgagcgcgcccgcgccctggtcgacggcgcgctgcgcgacgtctccgag
cgcatcgcggccgaggccggccgcgtccgcgacgtcatgaccgcgtccgccgacctcgtc
gccggccgcctcgacagcgagaccgcccgcagccgcgacacgctcgccgccgcggtcgag
gccctcgccggcaagctggtcgacgagaccggccgcgcccgcgagatcctctcgaccatg
ctcgacggcgtcggcgacaagctcggctccgagagcgagcgcgtccgcggcctcgtggtc
ggggcgatcgacgccgccgccgcccgcctcgccgaggagtcgcagcgcaccgccgtcgtg
ctcgccgccaccgccgaggaggccgcttcccgcctcgccgccgagcgcggcgatctccag
ggcgccttcgtcgccacgctcgacgccaccaccgaccggctcgccgccgagcgcgtccgc
actcgcgacgccctcgccgaggccgccgacgagaccgccgcgcgtctcgccgccgagcgc
gacctcacccgcgccgccctcgcggccgccacggacgagaccgcccgccgcctcgccgac
gagcgcgagcgcacccacgccgccctcgccgcgacggtcgacgaaaccgccgagcgcctc
ggtgccgagcgcctgcgtacccacgaggcgctcacggccagcgtcgacgagaccgccgac
cggctcgccgccgagcgggaccgcacccgcgacatcctcgccggcgcggtcgaggacacc
gcggcccgcctcgccgccgaacgcgaccgcacccgcgtcgcgctggtcgcggccatcgac
gagaccgccgaccgtctggccggcgagcgcgagcgcaaccgcgaggcgctgatcgacggc
gccgacggcttcgccgcggcgatcgccgccgagcgcgaccgcactcgtgccctcttgacg
gagctcgcgacttcgatctcctccgccctcaccggcgagagcgagaaggcccgcgcgatc
gtggaggccaccgtcgccgacgtcgccggccgcctcggcggcgagagcgagcgcgtccgc
gccaccgtggtcggcaccgtggaggaagtcagcggccgcctgatcgccgagagcgagaag
gcccgcgccgcgctggtcgcctcgctcgacgaggccaccgaccgcctgtccggcgagagc
gcccgcgtccgctccaacatcatcggcgccgccgaggacatcacctggaggctgtcgacc
gagagcgagaagcaggcgagccagctcgagagcgccatcgacgccgcgacccggcggatc
caggaggcctcgacgctgctcgagtccgccctgctcgaccgcaccgcgaaggccgccgac
gagctcgacgtccgctccgagcgcctcgccgccctgctcaccgcccgcctgtccgagctc
ggcgagctcatcgacggccgcggcggcgaactcgcccgctcgttcctctccggcacgcgc
agcctgaccgacatcgtcgacaaccgcggcgacgagatcgccgccaaggtccgcggtgcc
gccaacgacgtgctggccgcactcgccgacggtggcgagggcgtcagccgggcgatcgcc
gagcgtggtcaggagacctcgcgcaccctcgccgcgacctcgcgcactctcctgtcgacc
ctcgacgagcagggtcgttcggtggtcgccgcgctggacagcaccaacgcccgcgtcaag
gacgacgtttcctcgatcctcgaccagctcgaccgctccaaccgcgcgctccagaccatc
ctggagcaggccggcggcagcctgtcgcgcatcgagcgcagcctcgcccagcagaccggc
gacttccgctcggtgatcgaccgcgtggtcgacgacaccgcggaatcgacccgcgcgatc
gccgacaacgtcggcacgctgaagtcggtctccaccgacgtgctcggcgagatcgcccgc
atcgccgcccgcttcggcgagcagacccaggcggtgcagaccgcgggctcggcgctcgcc
gccgcggccggcggcttcgagggcgtcgtcgacgagcgccgcggcgcgctcgagcggatc
gccgccaccctcgccgacaagagcggcaaggtggaggacgccatgcgcggcttctccgcc
ctgatcaaggacaccctcgacaccgccgagcgccgcgcccgcgacgtcggcatgctgctc
gcccgcagcgccgagacggcggcgacctcggtcaccgagcagatccagtcgctcggcgtc
accgcggagctcgagggcgagaagaccaaggaggccgtcgagcggctgcgcgagcggctg
gtcgccgagatcgacgcctcgatcggcggcgcggtcgaccgcttcgccgagaccgccgag
gagatgcgcaaggcgacccgcgccgtcagccgcgaactcgaggagatccgcgaggagatc
ggccgcggcgtgctcgacctgccgcaggagaccagccagcacgccgccgcgatgcgtcgc
gtcgtcagcgagcagatcaaggcgctgaacgagctcggcgagatcgccgcccgccacgcg
gcgtcgagcgaggcttcgggcagtcgcggccgcccgtccgcctcgtccggcggcacagcg
gtgctggaggccccgcgccctgccccgcgtccgcaggcccccgccgcgcccgagcgggcg
ccggtcgagcggcccgccgccgtcgagcgtgccccggtcgagcgtccgcaggccgagcgg
ccctcgatcgagccctacgccttcccggccgaaccgcgccgtgccgagccgcagcgcccg
gccgagggtggccgcgagcgcggctggatcgccgatctcctgcgccgcgtcgccgccgac
gagggtcgcgagcaggaggccccggcccggggcggcgagccgcgtccggtcgagccgccg
cgcaacgccggccacaccatcgagagcctgaactcgctctcggtcgacatcgcgcgggcg
atcgacaacgaggccttcgtcgacctctggaaccgctaccgtcgcggcgagacccacgtc
ttcacccgccggctctacaccctccagggccagcagacgttcgacgagatccgtcgcaag
taccagcgcgacggcgagttccgcgccgcggtggaccgctacatcgaccacttccgggcg
ctctacgacgacgccgtccgcaaggatcccgagggcgccctcgcgctcggctacctcaac
tccgacaccggcaaggtctacaccatgctggcgcacgcgagcggcaagctgggctga
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