Pleomorphomonas sp. SM30: OHA_2_00057
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Entry
OHA_2_00057 CDS
T05766
Symbol
nicR
Name
(GenBank) HTH-type transcriptional repressor NicR
KO
K22296
MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
Organism
pleo
Pleomorphomonas sp. SM30
Brite
KEGG Orthology (KO) [BR:
pleo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pleo03000
]
OHA_2_00057 (nicR)
Transcription factors [BR:
pleo03000
]
Prokaryotic type
Helix-turn-helix
MarR family
OHA_2_00057 (nicR)
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GFIT
Motif
Pfam:
MarR
MarR_2
HTH_27
TrmB
Penicillinase_R
TFC3_eWH
Motif
Other DBs
NCBI-ProteinID:
BBE74855
LinkDB
All DBs
Position
pSM30-1:complement(72576..73025)
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AA seq
149 aa
AA seq
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MDGEGEARETDGTEVYRLHDQIGFLLRQATQRHIAIFGARMGDRLTTTQWSALVKLAELE
PISQNQLGRETSMDVATVKGVVDRLVGRGFVRTAPDPRDGRRLVLGVTDEGRAAIARNLA
VAAEVTRETLAPLTPGERILLAELLRRIA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgagggcgaggcgcgggagacggacgggaccgaggtctaccgcctgcacgac
cagatcggcttcctgctgcgccaggcgacccagcgccacatcgccatcttcggcgcccgc
atgggcgaccgcctgacgacgacccagtggtcggcgctggtcaagctcgcggaactcgag
ccgatctcgcagaaccagctcggccgcgagacctcgatggacgtcgccaccgtcaagggc
gtggtcgaccgcctcgtcggccgcggcttcgtgcgcaccgcccccgatccgcgcgacggc
cgccgcctcgtgctcggcgtgaccgacgagggccgcgccgccatcgcccgcaatctcgcg
gtcgccgccgaggtcacccgcgagacgctcgccccgctcacgcccggcgaacgcatcctc
ctcgccgaactgctgcgccgcatcgcgtga
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