Plectropomus leopardus (leopard coralgrouper): 121939216
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Entry
121939216 CDS
T07454
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plep03041
]
121939216 (ddx27)
03009 Ribosome biogenesis [BR:
plep03009
]
121939216 (ddx27)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121939216 (ddx27)
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121939216 (ddx27)
Ribosome biogenesis [BR:
plep03009
]
Eukaryotic type
Pre-60S particles
Helicases
121939216 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
SNF2-rel_dom
PRK
Motif
Other DBs
NCBI-GeneID:
121939216
NCBI-ProteinID:
XP_042338231
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
AVVSLQAVTALGFKQPTPIQKACVPVGLLGRDLCACAATGTGKTAAFMLPVLERLVYKPR
TSQVTRVLVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEVALRAGPDVLIA
TPGRLIDHLHNTPSFELTHIEILILDEADRMLDEYFEEQMKEIIRLCSYNRQTMLFSATM
TEEVKDLAAVSLKEPVRIFVNSNTDVAPFLRQEFVRIRQNREGDREAVVAALLTRTFQDH
VMCFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDNQIDVLVATDVAAR
GLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESERKILKEVVKSAKSS
VKARVLPPEVILKFRDLICKLEKDVDAVMKLEREERELAASEAKLSVAKKRLDGSASSSQ
SQRVWFQTQQERKQSR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ctgccgttgtgtccctgcaggctgtcacagctctgggcttcaagcagccgactcccatcc
agaaagcctgcgtccccgtgggcctgttgggccgagatctgtgcgcctgcgctgctactg
ggacaggaaagacggccgccttcatgctgcccgtgttggagcgtttggtttataagccca
ggacgtcccaggtgacgcgggtcctggttctggttcccaccagagagttggggatccagg
ttcactctgtggcccggcagctcgcccagttcacctccataaccacctgcctcgcagtcg
gtgggttggacctgaagtctcaggaggtggcgttgagggcagggcctgatgttctcatcg
caacacctggtcggttgatcgaccaccttcacaacacaccaagcttcgagctgacccaca
ttgagatcctgatcctggatgaggccgacaggatgctggacgagtacttcgaggaacaga
tgaaggagatcatccgcctgtgttcctacaaccgacagaccatgctgttctccgccacca
tgacggaggaggtgaaggacctggcagcggtctcgttgaaggagccggtcaggatcttcg
tgaacagtaacactgacgtcgctccgtttctgagacaagagttcgtccgaatccgacaga
accgagagggagacagagaggcggtggtagcagcgctgctgactcgcacgttccaggatc
acgtcatgtgtttcacccagaccagaaaacaggctcacagactgcacatcctgctgggac
tgatgggactgaaggtcggagaactgcacggagaactcagccagaaccagagactggaga
acctcaggcgatttaaagacaatcagatagatgtcttggtggcgacggacgtagcagccc
gaggtctggacatcgacggagtgaaaacggtgataaacttcaccatgccgtccacagtga
agcactacgtccaccgtgtgggccggacggcgagagcgggtcgctcaggacgctcggtgt
ctctggtcggagagtctgagaggaagatcctgaaggaggtggtgaagtcggccaaaagca
gcgtaaaggctcgagtcctgccgccagaggtgatcctgaagttcagagacctgatctgta
agctggagaaggacgtggatgcagtgatgaagctggagagagaggagagagagctggcgg
catctgaggccaagttgagcgtggctaagaagcgcctcgatggctccgcctcttcctctc
agtcacagcgggtgtggtttcaaacacagcaggagaggaagcagagtcgca
DBGET
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