Plectropomus leopardus (leopard coralgrouper): 121940421
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Entry
121940421 CDS
T07454
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04010
MAPK signaling pathway
plep04020
Calcium signaling pathway
plep04144
Endocytosis
plep04510
Focal adhesion
plep04540
Gap junction
plep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121940421 (pdgfra)
04020 Calcium signaling pathway
121940421 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121940421 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121940421 (pdgfra)
04540 Gap junction
121940421 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121940421 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plep01001
]
121940421 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
plep04090
]
121940421 (pdgfra)
Enzymes [BR:
plep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121940421 (pdgfra)
Protein kinases [BR:
plep01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121940421 (pdgfra)
CD molecules [BR:
plep04090
]
Proteins
121940421 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
C2-set_2
Receptor_2B4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121940421
NCBI-ProteinID:
XP_042339135
LinkDB
All DBs
Position
3:complement(31927821..31951486)
Genome browser
AA seq
1465 aa
AA seq
DB search
MDGVKAYVVFGGILVALVSVTSALSPPTIVSNKDEFILQPNSVFNISCTGKRNVVWVEPL
PKNTFVYPGYYTATLFIYNATVENTGYYMCTYEDDLGSEPEEDNEAGIYVFVPDPQAPFV
PETPENLVVPMYVPGVPISCRVSDPYSNVILRSVPSGEEMSTYYDNKMGFFGSLLPGQYQ
CETTVNGQTMRSAVYTVETEAPVEMEDFNIEVKASEETLRAGQPFNVTCVAPTGLGFHQQ
WLHPKKQAVDAIQMKQTLPDRVIYTLSIPQATAQDSGTYECSITHEISGKVRVSSVAVTV
FEENSFVALDHSGILATEFVSLLEETEFTILIDAYPAPKVTWLKDGKVMPQTYYVLTKTS
HLEGNRYQSILIFRQPLGKDNGNYTITALSGSRTAQFSFTLKVKAPTAMMFPPSSAPVLL
PQVEEMVVPLHTPFTLTCRGEAKLAWETPIDVHEQTQEDNSGLFVTTVTVNNATAMHTGY
YTCFYSRNSTDDSEDSSIYIYVPDPDVPFVPSPVPFGNHVLSDHEEMEIQCRVSDPSANV
TLVNVDTQQPVPSVYDSKRGALGVFTAGTYVCKAVINGEEHVSGEYIVHGWTGGTGLHVE
LTAKRTALLVGDTITVNCLARGSEILEDHWKYPGKLANRAVKTVHENKRDQEILYTLTIP
QASTKDSGIYSCSITDIISNESQTKELVIRVFASEFMSVWPEFGEYESAELDEVREFRAE
ISSFPSAHVTWLKDGIPLSDVTAEISTSLRQLSETSYMSVLTLIRAKEEDSGNYTLRVEN
GDQIRDVGLILEVKVPAVIVELMDIHHGSATGQSVVCITRGQPTPVVEWFVCKNIKHCAN
DSSSWVPLPANSTEITMDSHIDEDSNLESQVMFGHLESTLAVRCLARNEMAAVSREVKLV
SNGPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDP
MQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE
KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFLSLN
PEKSKKELDIFGINPADESSRSYVILSFESKGDYMDMKQADNTQYVPMLEMSNASKYSDI
QRSDYDHPPSQKEGEMDDMLSDDMNEGLSTTDLLSFTYQVAKGMEFLASKNCVHRDLAAR
NVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTTLSDVWSYG
ILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPSDVYEMMMKCWNSEPEKRPS
FLGLSETVSSLLPSSYKRHYERVNHEFLKSDHPAVTRVCMENDDAYIGITYKNQGKLKDR
ESGFDEQRLSSDSGYIIPLPDLDPISDDEYGKRNRHGSQTSEESAIETGSSSSTYAKREG
ETLEDITLLDEMCLDCSDLGEDSFL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtaaaggcgtatgtcgtctttgggggtatcctggtggcgctggtttcagtg
acttccgcactgtcgccacctaccatcgtgtccaacaaagacgagttcatcctgcagcca
aattccgtcttcaacatcagctgtaccggcaaaagaaacgtagtttgggttgaacctctg
ccgaaaaacaccttcgtttatccgggatactacacggcgacactttttatttacaacgca
actgtggaaaacaccggatactacatgtgcacctatgaggatgacctggggtccgaaccg
gaagaagataatgaagcgggaatatatgttttcgttccagatccccaggctccatttgtc
cccgagacccctgaaaacttagtcgtccctatgtatgtacctggggtccccatttcctgc
cgtgtgtctgacccctactctaacgtcatcctgaggagcgtccccagcggagaggagatg
tccacctactacgacaacaagatgggcttctttgggagtctcttgcccgggcagtaccag
tgtgaaaccaccgtgaatgggcagacgatgagaagtgcggtttatactgtggagactgag
gcccctgtggagatggaggatttcaacattgaagtgaaagccagtgaggagacattgaga
gccgggcagccttttaacgtcacgtgtgtcgctcccactgggctgggctttcatcagcag
tggctccatcccaaaaaacaggctgtggatgcaattcagatgaaacagactctccctgac
cgggtcatctacacactcagtatcccacaagccactgctcaggacagcggcacctacgag
tgctccatcacccacgaaatcagcggaaaggtcagagtcagcagcgtggctgttactgtc
ttcgaggagaattccttcgtggcactggaccacagtgggattctggctactgaatttgtc
agtcttttagaagagacagagtttaccatcctcattgatgcctacccggccccgaaagtg
acgtggctgaaggacggcaaagtcatgccacaaacctactacgtcctcaccaaaaccagc
caccttgaaggcaatcggtatcaaagcattctgatatttcggcagcctctggggaaagac
aacgggaattataccatcacagccctcagtggctctcgcactgctcagttctcctttacc
ctcaaagtgaaagcccctaccgcaatgatgttcccaccctcctcagccccagtgctgctg
ccacaggtggaggagatggtggtgcccctccacactcctttcaccctgacctgtcgagga
gaggcaaaactagcctgggagacaccgatcgatgtgcacgagcaaacacaggaggacaac
agtggtctgtttgtcaccaccgtcactgtcaacaacgccactgccatgcacaccggctac
tacacttgcttctacagcagaaacagcactgacgattcagaggacagcagcatctacatc
tatgtgccagatccagatgttccctttgtgccatcgccggtgccttttggcaaccacgtg
ctgtctgaccacgaggagatggagatccagtgtcgagtgtctgatcccagtgctaacgtg
accctggttaatgtggacacccagcagcctgtgcccagtgtttatgacagcaagaggggt
gctttgggagtattcactgctggaacctacgtctgtaaggccgtcataaacggagaggaa
cacgtcagcggggaatacatcgtccacggctggacaggtggcactgggctgcacgttgag
ctgacggccaaacgcactgctctgctggtgggagacaccatcacagtcaactgtctggct
cgggggtctgagattctggaagaccactggaaataccctggcaaactggctaatcgtgct
gtcaagacagtgcatgagaataagagagatcaggagatcctttacaccctgacgatccct
caggcctcaaccaaagacagcggcatctactcctgctccatcactgatattattagcaat
gagagccagacaaaggaactagttattcgagtttttgcaagtgaatttatgtccgtgtgg
ccggagtttggagaatacgaatctgcagagctggatgaagtccgcgagttcagggccgaa
atcagctccttccccagtgctcacgtcacttggcttaaagacggcatcccgctcagcgat
gtgacagccgagatctccaccagcctccggcagctcagtgagaccagctacatgagtgtt
ctcaccctgatccgcgccaaggaggaggacagcgggaactacaccctgcgagtggagaac
ggagaccaaattcgtgatgttggattaatcctggaggtcaaagtgcctgcagtcattgtg
gaactgatggacatccaccatggctcagccacgggccaatctgtggtgtgtattaccaga
gggcagccaactccagttgtagagtggttcgtctgcaagaacatcaaacattgtgccaat
gactcgtcctcatgggtgcccctccccgccaactccaccgagatcacaatggactcgcac
attgacgaggacagtaacctggagagccaagtcatgtttggtcacctggaaagcacgctg
gcggtacgctgcctagccaggaatgaaatggctgctgtcagcagggaggtcaaactggtg
tccaatggccctcaccctgaactgactgtagctgctgctgtgctggtgctcctcgtcatt
gtcatcatctcactcattgtcttggttgttatttggaaacagaaaccacgttatgaaatc
cgctggagggttatcgagtctgtgagcccagacggccatgagtacatctatgtggatccc
atgcagcttccctacgactccagatgggagttcccccgtgacaggcttgtgctcggtcgt
atcttgggctctggggcctttggaaaggtggtagaaggcactgcctatggtctcagccgc
tcccagcctgtcatgaaggtggcagtgaagatgctgaaacccacagcccgctccagtgag
aaacaggccctgatgtctgaactgaagatcatgactcatcttgggccgcatctcaacatc
gttaacctcctgggagcgtgcaccaagtcaggccccatctacataatcactgagtactgc
ttctacggagacttggtcaactacctgcacaagaacagggagaacttcctcagcctgaac
ccagagaagagcaaaaaagagctggatatctttggaatcaaccctgcagatgagagcagc
aggagttatgtgatcctgtccttcgagagcaaaggagactacatggacatgaagcaggct
gacaacactcagtatgtccccatgctggagatgagcaacgcctccaagtactcagacatc
cagaggtctgactatgaccacccaccctctcagaaagagggtgagatggacgacatgctg
tcagatgacatgaacgagggcctcagcaccaccgatctgctcagttttacctaccaggtg
gccaaaggcatggagtttctggcttccaaaaattgtgtgcatcgggacctcgctgccagg
aatgtcctcctctctcagggcaagatagtgaagatctgtgacttcggactggcccgagac
atcatgcatgacaacaactatgtctccaaagggagtactttcctgccagtgaagtggatg
gcaccagagagtatttttgacaacatgtacaccactctcagtgatgtttggtcctatggc
atcctactctgggagatcttctccttaggtggcaccccatacccggggatggttgtggat
tcaagcttctacaacaagatcaagagcggatataggatgtccaaaccggagcacgcacct
tctgacgtgtatgagatgatgatgaagtgttggaacagcgagccagagaagaggccgtct
ttcctgggcctgagtgaaactgtatcttctttgctgccttccagctacaagaggcactat
gagagggtgaaccacgagttcctgaagagcgaccaccccgctgtgactcgggtgtgcatg
gaaaacgacgacgcctacattggcatcacctacaagaaccagggcaagctgaaggacagg
gagagcggcttcgacgagcagcggctgagctccgacagcggctacatcatccccctcccc
gacctggaccccatatctgacgatgaatatggaaagaggaacagacacggctctcagaca
tccgaggagagcgccattgagacgggctccagcagctccacttacgcgaagcgtgagggc
gagactctggaggacatcacgctgctggatgagatgtgtctggactgtagcgacctgggg
gaggacagcttcctgtga
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