Plectropomus leopardus (leopard coralgrouper): 121940816
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Entry
121940816 CDS
T07454
Name
(RefSeq) nuclear pore complex protein DDB_G0274915-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121940816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121940816
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121940816
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121940816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121940816
NCBI-ProteinID:
XP_042339433
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
ENSEDDKKRGRSTDSEVSQSPVKNGNPSSSLSSSSSSSSSSSSSSSSSSSSSSVSGLTSS
SLVSMATITAGGLSGSGGNSHHGSSGGLLSNTSAGSYSNATQQQLHPSAQQQQAKNLVSS
PSSAPISIPIPSTNSHLASSASSPPNAITQGLFTSNSQPSALSGPTPTSNSLGLSLGLSL
GKGGMSGSITTSPMSGSLGLSGMPASLSSMASLLSGSTPAPYAQAAASGAIGSGLPGSLG
GIGISPTTTNSAVGSIGSGSITVGGPTSSTGGLLGPAPGLTSVGSGILGLSSGQSGMQGS
SLVSLSPVGGLAPGSGVGVIGSNGGSSGSGGSGVVGGNSSLSIRPPSQQKQNGSTSYSAV
VADSTTDSALTSASQSQSSQPSSLTSTANQPKDTGPSLLGSLSLSSSSPSPAFYSEAKTV
SGGSLLNGPLSYSQSSDGIK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gagaactcagaagatgacaagaagaggggacgttcaacagacagtgaagtcagtcagtct
cctgtgaagaatgggaacccctcttcctcgttatcctcttcctcctcctcctcatcttcc
tcctcctcctcctcctcctcctcctcttcttcttcctccgtctcgggactgacctcatcc
tcacttgtctctatggcgaccatcacggcgggaggtctcagtggctctgggggcaacagt
catcacggcagctcggggggtctcctctccaacacttcggctggcagctacagcaacgcc
acccagcagcagctgcatccatcagcacagcagcagcaggccaaaaacttagtcagctcc
ccctcctccgctcccatctccatccccatcccctccaccaacagccacctggcctcctcc
gcctcctctccccctaacgccatcacacaggggctcttcacctcaaactcccagccttca
gctctgtcggggcccacgccgacctccaacagcctcggcctcagcttggggctctctctg
gggaaaggcggcatgtccggctccatcaccaccagccccatgtccggaagccttggcctc
tcagggatgccggcatccctgagcagcatggcgagcctcctgtcaggctccaccccggcg
ccctatgctcaggcggccgcctcaggagcgatcggctccggcctgccgggctctctgggt
ggcatcggcatcagccccacgacgaccaacagcgcggtgggctccatcggcagcggcagc
atcacagtcggcgggccgacgtcctcaacaggaggtctgctaggcccggcgccggggctg
accagcgtgggctcggggattctgggtctgagttctggtcagtcagggatgcaggggtct
tcgctggtgtcactgagcccagtaggaggtttagcgccgggaagcggagtgggagtcatc
gggagtaacggaggcagctcggggtcaggagggagcggagttgtgggaggaaactcgtcg
ctctccatcaggccgccgagccaacagaagcagaacggtagcactagttacagcgctgtg
gtagcagacagcacaacagactccgccctcactagtgccagccagtcacaaagcagccaa
ccctcgtctttgacctccacagccaatcagcctaaggacactggtcccagtttactgggc
tctctaagtttgtcatccagctccccgtcgccggccttctacagcgaggccaaaacagtg
agcggtggcagcctgctgaacgggccgctgtcctactcgcagtcctccgacggcatcaag
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