Plectropomus leopardus (leopard coralgrouper): 121940967
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Entry
121940967 CDS
T07454
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121940967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121940967
03036 Chromosome and associated proteins [BR:
plep03036
]
121940967
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121940967
Coactivators
SAGA/TFTC/STAGA complex
121940967
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121940967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
121940967
NCBI-ProteinID:
XP_042339587
LinkDB
All DBs
Position
1:31356502..31459941
Genome browser
AA seq
1016 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNTAGKTDENGGAGSVPPANHHLGK
TLPAPVGTTTLEQQQQGRRNKPEMRQEINSKDVSLDKTVTSSSLGCSPSFGEPSTTSAAC
VNATSSGSLSHGASITTLTASGVSTLASTPASISTAASRGSKVCSGTGEASAEAHPPRKR
ITTPRRSASARIKSLNGAAVTTRRSSNTAENVSSVDTSAATPNSTRPVTSSINTSTFTLS
NANLPSGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGPINASAP
LGNKTLTETGASKTDDCQSKIVMSSQSGSVNSVINTVSSAPSVVTPTTTAAAATTTSVTQ
PLSSAPAAACVTASSVCATGQTTTVTTTISMVRPTAPSPTPAVATSAQTQPRPGLTAPQR
IVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQAQAQAQAQN
NISPRPATPTTGASFRVTTPQKGPVAPAVAVTAPQQTPVVMAPQAQAQAASQPVQPPQTG
ITANPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPE
EFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQQGVKPAPGGPPPAIV
AGPAVRIRHPNSVSITTGASALPAGTLGHAAGMGIKTAGTVGGQVRMPVVITQSVRAQGT
MGKGGIIQAGKGPVGLAVQISGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARI
LATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHATQSRLRT
VVEKVSAIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKQRKDEQEREILLKAAKS
RSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATPSGTEV
SGSTAGSLASSSTPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRALLK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtcacagcttgccggccaaagcaacacagcaggt
aaaacagacgaaaacggaggcgctggctcagtgccccccgctaaccatcacttaggaaaa
acgctaccagctcctgtgggcaccacaacactagaacaacaacaacaaggacgccgtaat
aaacctgagatgcgccaggagatcaactctaaagacgtcagcctggataaaactgtcaca
tcttcctctcttggctgtagcccttcttttggcgagccctccaccacttcggctgcctgt
gtgaacgccactagcagcggctcgctatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcatccacgccagccagcatcagcaccgcggccagccggggg
tctaaggtttgctcgggcacaggggaggcgtcggcggaagctcacccgccgagaaaacgc
atcaccacgccgcggaggagcgcttcggctcggataaagagtttgaacggcgccgctgta
acgacgaggaggagcagcaacacagctgaaaacgttagctctgtggacaccagtgcagcg
acacctaactctactcgaccggtgacctcttctattaacacctcgactttcaccctgtca
aacgctaaccttccttcaggtcagtcggctattgctctggaccgggggactcctaccatt
gctttgcatagactccccagtcacattgtagcgagcatagcccagaacggtaacgggacc
agtgtttcggccttggtccagcagggcgctcgcataggacctatcaacgcctcagctcca
ctggggaacaaaacactcacagaaaccggggcttccaaaacagacgattgtcagtccaaa
attgtaatgtcaagccagtctggtagtgtcaactctgtaataaacactgtttcctctgcg
ccttctgttgtcacaccaacaactacagcagcagcagcaacaaccacatcagtgacccag
cctctgagctctgctccagctgctgcttgtgtgacagcgagttctgtatgtgcaactggt
caaactacaacagtgactactactatcagcatggtcaggcccacagccccctctccaaca
cctgctgtggccacctctgcacagacgcaaccccgtcctggacttactgcacctcaaagg
atcgtagccccccagctgattgtcagaccacctcagcagcagacgaccattcagctgccc
ccagggtttaccatcccaccggggatggtgttggtacgcactgagttgggacagctagtg
atggttcctcagcaggctttggctcaggctcaggctcaagctcaggctcaggcccagaac
aacatctctccacgacctgccactcccacaacaggagcatccttcagagtaacaactcct
cagaagggccccgtggcaccggccgtggctgtgacggctccgcagcagacccctgtggtt
atggccccccaggcccaggcccaggctgcctcccagccagtgcagcctccgcagacgggc
atcaccgcgaaccccggaggtcctgtcgtgtcccaggaaatgcaagagaatgtgaagaag
tgtaagaatttcctggctacactcatcaagctggcgtctcacaactctccgtcacctgag
acttccaagaacgtcaaagctttggttcaggacctgctggatgccaagattgaaccggag
gagttcaccagccggctacagactgagctgaagtcctctccgcagccttacctggtgccc
tttctcaagaagagcctcccggccctgaggctgtctttgctgaatagtcagcagtccctg
acccagcctccgcagcagggagtcaaaccagcacccggcggcccccctcctgccatcgta
gctgggccagctgtccgcatacgccaccctaacagcgtcagcatcactacgggtgccagt
gcactgcccgctgggacactcggacatgcagctggcatgggtatcaagacagcaggcact
gtcggtggccaggtccggatgcccgtggtaatcacacagtctgtcagagcgcaaggcacg
atggggaagggaggcatcatccaagcaggcaaaggtcccgtgggcctggctgttcagatc
tctgggaatcagaaaaacaagctcaacgaccccggaggaggttctttcagggatgatgat
gacatcaatgacgttgcctccatggccggggtgaacttgaatgaggagagcgcaagaata
ctcgccaccaactctgaactagtgggaacgcagatccgctcatgcaaagacgaggccttt
ctccatccgggactgctccatcgacgaattctggaaacagcaaagaagtttggagtcacg
gaggtccctatggaggcagtgacattcatctcgcacgccacacagtctcgacttcgaact
gtggtcgaaaaggtttctgccatcgcacaacaccgactggactcttgtaaggatgatgag
tgttacgagcagtccgcagacgttcgctctcagcttcgcttcttcgagcagctggagaga
atggagaagcagaggaaggacgagcaggagagagagatcctgttgaaagccgctaaaagt
cgctccaggcaagaggacccagagcaagctcgactgaaacagaaagctaaggagatgcaa
caacaggaactggctcagatgaggcagcgagatgccaaccttacagcactagccgccatc
ggaccccgcaaaaaacgcaaagtggattcaccaggggccaccccatcagggaccgaggtt
tcaggcagcacagcgggctccctggccagctcctccaccccgtccacctcatcgcgccag
tacacacggcaacgcatcactcgcgtcaacctcagggacttaattttctacatggagcag
gagagagagaccgcccactccctcctcctttaccgtgccctgctcaagtag
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