Plectropomus leopardus (leopard coralgrouper): 121941026
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Entry
121941026 CDS
T07454
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plep03009
]
121941026 (ddx10)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121941026 (ddx10)
Ribosome biogenesis [BR:
plep03009
]
Eukaryotic type
90S particles
Helicases
121941026 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
SecA_DEAD
PAS_11
DUF5811
Motif
Other DBs
NCBI-GeneID:
121941026
NCBI-ProteinID:
XP_042339660
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All DBs
Position
3:150951..157315
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AA seq
845 aa
AA seq
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MEKKGTNSFGKKRKTVKKKDGADPVKNFEKWKKKYNKTKAAVKRDRAPKKPEWQVEREDI
QRLVSRYSDINSMEVVKFSDFPISKKTLLGLQEAQCRQPTEIQRQTIGLALLGKDVLGAA
KTGSGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAG
LVIGGKELKGESERIHRTNIVICTPGRLLQHMDETATFHASNLHMLVLDEADRILDMGFA
DTLNAIVENLPKSRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQSYV
VCELQHKVNMLYSFIRSHLNKKIIVFFACCKEVQYLFRVFCRLRPGMPVLALHGKQQQMK
RVEVYNDFLRKNSAVLFATDIAARGLDFPAVHWVLQFDCPEDADTYIHRVGRTARYKEGG
EALLLLLPSEEKGMVSQLQEKKVPINKIQVNPDKVQHVEQKLEAFLAQEKEQKERAQRCF
VSYLRSIYLMKNKEVFDVFKLQIQEYAVSLGLAVAPRVRFLSKAQAQRAERRAQREEEHS
EEEKEQRSFKAQLKGNIHHEESQRSDSEDSGDDEDGGDEGEMGQAKTRLLAAEDEDDDDD
DDLRDLELLTVKRKDVFNLTGDDEGPEVPAKKKLEKQSSKFKEAKKALKRNFQVNTKVVF
SEEGETVQLWPPVQRAVTTGLEEEEEVSGINVEKARERLKREDQEFDKQEYSRKVKAKHR
EKRLKAKAARREASKTVGYKSDQDEEDEVVAYLANHSDDEFDPSTLPDPDKVRSEEEGEG
EGEEDQIMSAKRQHSSESSSEEEEELPTGSRKRARHQDEEHTALDTGLSLAEDEELVLHL
LGGRS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaggcacaaactcatttggcaaaaagcgtaaaacggttaagaagaaagat
ggcgccgatcccgttaaaaacttcgagaaatggaagaaaaagtacaacaagacgaaagcc
gcggtgaagcgggacagggcgccgaagaagccggagtggcaggtggagcgggaggacatc
cagcggctggtcagcaggtatagcgacatcaactccatggaggtggttaagttctccgac
ttcccgatttcaaagaagaccctgctgggtttgcaggaggcccagtgccgacagcccacg
gagatccagagacagaccatcggcctcgcactgctcggtaaggatgtcctcggcgcagcg
aagaccggctctgggaagactttggccttcctcattccggtgttggagtgcctttaccgg
cagcagtggagctccatggatggcctcggtgccctcatcatatcccccaccagagagctg
gcctaccaaaccttcgaggtcctccgcaaggtgggcaagaaccacgagttctccgcgggg
ctcgtcatcggcggcaaggagctgaagggcgagtcagagaggatccaccggaccaacatc
gtcatctgcaccccgggccgactgctccagcacatggacgagaccgccaccttccacgcc
tccaacctgcacatgctggtcctggacgaggcggaccgcatcctagacatgggctttgcg
gatacactcaacgccattgtggagaacctccccaagtcccggcagacgctgctgttctcc
gcaacgcagaccaagtcagtcaaagacctggcccggctcagcctcaaagacccagagtac
gtgtgggtccatgagaaagccaagttcagcacaccggccacgctggagcagagctacgtg
gtgtgtgagctccagcacaaagtcaacatgctctactccttcatcaggagccacctcaac
aagaagatcatcgtcttcttcgcttgctgcaaggaggtgcagtacctattccgggtcttc
tgccgcctcagacccggcatgccggtcctggctctgcacggcaagcagcagcagatgaag
agggtggaggtctacaacgacttcctcagaaagaacagcgctgtgctctttgccacagac
attgctgccagaggcctggacttcccagctgtccactgggtcttgcagtttgactgtccg
gaggacgcagacacctacatccacagggtgggccgcaccgccagatacaaggaggggggg
gaggccctgctgctgctgctcccctcagaagagaagggcatggtcagccagctgcaggag
aagaaggttcccatcaataagatccaggtgaacccagacaaagtgcagcatgtggagcag
aagctggaggccttcctggcccaggagaaggagcagaaggagcgagctcagaggtgtttt
gtttcctatctgcgctccatctacctgatgaagaacaaagaggtgtttgatgtttttaaa
ctgcagattcaggagtacgctgtctctctgggcctggcagttgctcccagagtgcgcttc
ttaagcaaagctcaggcccagagagcggagagaagagcgcagagagaggaggagcactct
gaagaagagaaggagcagaggagctttaaggcccagctaaaaggaaacattcatcatgag
gaaagtcagaggtcagactcagaagattcaggcgatgatgaggacggtggtgatgaagga
gagatgggacaggccaagacccgactgctggctgcagaagacgaggatgatgatgatgat
gatgatctcagagacttggagctgctgacagtcaaaagaaaggatgtcttcaatctgacg
ggggatgatgagggccccgaggtccctgccaaaaagaaactggaaaaacagagttcaaag
ttcaaagaagccaaaaaggccctcaaaagaaacttccaggtcaacaccaaagtggttttc
agtgaggagggagagactgtgcagctgtggcctccagtccagcgggcagtgaccactgga
ctggaggaagaggaggaggtctcaggtatcaatgtggagaaggccagggagaggctgaaa
cgtgaggaccaggagtttgacaaacaggagtacagccgcaaagtgaaagccaaacaccga
gagaagaggctgaaggccaaggcagcccgcagggaggccagcaagactgtgggatacaaa
tctgaccaggacgaggaggacgaggtggtggcctacctggccaatcacagtgacgacgag
tttgaccccagcaccttgccagatcctgacaaagtgcgctctgaggaggagggggagggg
gagggggaggaggatcagataatgtcagccaaacggcagcacagcagtgaaagcagtagt
gaggaagaggaagagctccccacagggagtaggaagagagcgaggcatcaggatgaggag
cacacagccctggacacggggctgtctctggctgaggacgaggagctggtcctccatctg
ctgggagggcggagctag
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