Plectropomus leopardus (leopard coralgrouper): 121941096
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Entry
121941096 CDS
T07454
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121941096 (lingo3a)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121941096 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
V-set
LRR_RPS2
Cupin_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
121941096
NCBI-ProteinID:
XP_042339749
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All DBs
Position
3:27179843..27227161
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AA seq
610 aa
AA seq
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MGVSLGQDEGWLLPFLFLLLMIIVSPTQGQGCPQRCECIAKHKTVSCYGKRLSALPDSIP
LDTKILDLSGNKLRWVEQGDMLPYTRLEKLDLSENMISVLEPNAFSSLQNLQLLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDYTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISTLEDQNFRKLGNLRGLEIDHWP
FLEHISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVNTNLVVVQPYALGGLRQIRLLNLSTNGLVSLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDSASPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVSAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagcctgggccaggatgaaggctggctcttgcctttcttgttcttgctactg
atgatcatagtgtcgcccacccagggtcaagggtgtccccagcgttgtgagtgcattgca
aaacacaaaactgtgtcttgttatggtaaacgcctgtccgcgctcccagacagcatccca
ctcgacaccaagatcctggacctgagtgggaataagctccgctgggtagagcagggtgac
atgcttccatatacacgtcttgagaagctggacctgagtgagaacatgatcagcgtcctg
gaaccgaatgccttttctagtctccagaacctgcagttgctgtcactgaggggtaaccag
ttgaaactggtcccaatgggagctttctcacgtctgtccaacctaacttctttggacctc
agtgggaataagattgtaattcttttggactataccttccaagatttgaaaagtctgaaa
aacctggaagttggagacaatgatttagtttatatttccaacaaggcctttctgggtctg
gtggggctgagggagctgactatcgagaggtgcaacctgacgtctgtgtccagccagtct
ttgtcttacctgcacaacctggtgactctgcggctccgctacctcagtatctctacttta
gaggaccagaatttccgaaagttggggaatctgaggggcctcgagatcgatcactggccc
ttcttggagcacatttcccctcacagcctgcagggccttaacctatcttggctgtcgatt
actcacactaacatcacctctgtgcccacctcagccctccgcagtctggctcacctcacc
agcctcaacctctcctacaatccgatctctgtgctggagtcctgggcgctgcgggacctg
gtcaggctgaaggagctgcatctggtcaacactaatctagtggtagtgcagccatatgcg
ctgggcggtctacggcaaatccgcctccttaacctctccactaacggcctggtgtctctg
gaagagggagcctttcagtctgtcaacactctggagacgctgcgtttggacgggaaccct
ctggcctgcgactgccgcctgctgtggatccttcagcggaggaagaccctcaattttgac
agcgcctccccagtgtgcatgacgccagtggaggtgcagggacgggccctcaacgctttc
tcagactcggctctctttgatcactttacctgccagaagcccaaaatccgcaacaggaaa
ctgcagcaggtatccgcccgcgaggggcaggttgtgtcatttatttgcagagcagaaggc
gagccgacaccggtgatattctggatctctcctcagcgccgccgcatcactacaaagagc
agcggccgcctaactgtgttaccagaaggcacgttagaaattcggtacgcccaggtgaca
gacagtggaacctacatctgcatagccagcaatgcgggtggaaatgacacctattttgcc
acacttacagtcagcgggttgccacttgatgcagcccttatggccaaccgcacatactat
gctggggaccttaatgacacgaatctgaatgacaccagagtcttcttgaagtttactctg
gacctcaagaccatcctcatatccacagctatgggctgtatcatgttcctgggggtagtt
ctcttctgtttcattctgctgtttgtgtggagtcgagggagagggcagcacaagaacaat
ttctcagtggagtattctttcagaaaggtggacggacccgctgcaagtggaggacagggt
ggggcacgcaagttcaacatgaaaatgatttga
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