Plectropomus leopardus (leopard coralgrouper): 121941144
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Entry
121941144 CDS
T07454
Symbol
rorca
Name
(RefSeq) LOW QUALITY PROTEIN: RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121941144 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121941144 (rorca)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121941144 (rorca)
Nuclear receptors [BR:
plep03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121941144 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121941144
NCBI-ProteinID:
XP_042339802
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Position
3:complement(26272411..26285590)
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AA seq
474 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGLSVNEENGDLAD
HSRTYRRGSSAALSDLDDITTLPEGLLFDLPLTPEDGGGEYCNLDMLGGSGGSSSSSQSS
PEQTNLDFADGNHGIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIERITQTVLKSHIETS
QYSTEELKRMAWTLYSPEETRSYQTKSAEVMWQQCAIHITNAIQYXVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFATAHLFKALGCDDLVNAVFDLAK
SLSRIQMSEEEMALFSAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRCLQKEGASDEKLA
KMVSKLPIMKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggttattccgtgtaaaatctgtggggacaaatcatcagggatt
cactatggtgtcatcacctgtgagggctgcaagggtttcttccgccgcagccagcagaac
aatgctatgtactcatgctcacgacagaggaattgtctaattgaccggaccaaccgtaac
cgttgtcagcactgcaggttgcagaagtgtcttgctctgggcatgagccgtgatgccgtc
aagtttggcagaatgtccaaaaaacagcgcgacagcctgtacgcagaggtccagaagcac
caacagtcccaggaatgtgcagggctcagtgttaacgaggagaatggcgacttggccgac
cacagccgcacctacaggagaggctccagcgccgcgctcagcgatttggacgacatcacc
acgctgccagaaggtctgctttttgacttgccactgaccccagaggatggaggtggggag
tactgtaacctggacatgctgggcggcagtggaggcagcagctcgtcctctcagagctca
ccagaacagaccaacttggactttgcagacggcaaccacggcatcaagcatgagtaccag
ctgttgcatgactctggactcttctcacatgctatcctcaacccgctgcctgagggctgc
tccctgcttgagatagagcgcataactcagactgtgctgaagtcccacattgagacgagc
cagtacagcacagaggagctgaagagaatggcttggaccttgtatagtccggaagagaca
cgctcataccagaccaagtcagctgaggtgatgtggcaacaatgtgccattcacatcacc
aatgcaatccagtatngtgtagagtttgccaagcgcatttctggcttcatggatctctgt
cagaacgatcagattatcctcctcaaagcaggctgcatggatgttcttctgatccgtatg
tgtcgggcctacaaccccatcaataatacaatgctctttgatggaaagtttgcaactgct
catcttttcaaagctcttggctgtgacgaccttgtgaatgcagtgttcgacttggctaaa
agcctgagccgtatacagatgtcagaggaggagatggctctcttcagtgctgctgtgctg
ctctcaccagaccgaccctggctgacagatgttcagaagattcagaagttgcaggagaaa
gtctacgtggctctgcagcgctgcctacaaaaagagggagcatcagatgagaagctagct
aagatggtgtctaagcttcccatcatgaagtccatttgcaaccttcacatcgacaaactg
gagtttttccgcctggtccaccctgagacagcgtatacctttccccctttgtatagggag
gtttttggcagtgaaatcaccttcccagactccacagagggctag
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