KEGG   Plectropomus leopardus (leopard coralgrouper): 121941328
Entry
121941328         CDS       T07454                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121941328 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plep03400]
    121941328 (tdp1)
DNA repair and recombination proteins [BR:plep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121941328 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 121941328
NCBI-ProteinID: XP_042340042
LinkDB
Position
1:33539407..33550941
AA seq 616 aa
MSQDSQHGKWSISSSDDDDEDLPPSGSTTSKPHRPAVSNHSSHPSASPPRPKVEPATAEV
KPEPVNTPVSSLVIGSEARQSAAANQLNPVKYESSPSLAGKRKKEVSDGSGWALSDSDDD
GDVKQNLPKRAPPSPKTKKPKVENERPPSPHGRLYYIDEPEDFFESSILCLNDTFRFYLN
KVTGLDRKYNSGALHIRDILSPLFGTLKESVQFNYCFDIAWMVQQYPPEFRDRPVLIVHG
DKREAKARLVQQASPFPHIRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIILTSNLIRADW
YQKTQGMWMSPIFPRLPKGSSASAGESPTFFKRDLLEYLAAYRAPELEEWIQRIKEHDLS
ETRVYLVGSTPGRYVSSDMERWGHLRLRKLLYDHTEPVPGEERWPVIGQFSSIGSMGLDK
TKWLTGEFQRTMTTLGKSSLRSDPPMHLLYPSVEDVRTSLEGYPAGGSLPYSIQTAQKQV
WLHSFFHRWKADTTGRSHAMPHIKTYMRASPDFTQLAWFLVTSSNLSKAAWGALEKNNTQ
VMVRSYELGVLFVPAAFNMKTFPVNKKPFPVSSSSSGFPVPFDLPPTCYSPKDQPWIWNI
PYSQAPDTHGNIWVPS
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtctcaggacagtcaacacggcaagtggagcatctccagcagtgatgatgatgatgag
gatcttcctccttctggttctacaacgtctaagccccaccgacccgctgtatccaatcac
agctcacatccgtctgcctctccccccagacccaaagtggaaccagccactgcagaggtg
aaaccagaaccagttaacaccccagtatcctcgctggttattggctctgaggccagacag
tcagcagcagctaaccagttaaatccagtgaagtacgaaagcagtccgtcactggctggt
aagaggaagaaagaggtgtcagacggctcgggctgggctctctcagatagtgatgatgat
ggagatgtgaagcagaacttgccaaagagggcgcctccaagccccaaaactaagaaaccg
aaggtggagaacgagcggcctccgagtccccacggccgactctactacattgatgagcca
gaggacttctttgagtccagtattctctgtctgaacgacaccttcaggttttacctcaac
aaagtcacaggtctggacaggaagtacaacagtggagctctgcacatcagagacattctc
tctccattattcgggaccctgaaagagtcagttcagtttaactactgctttgatattgcc
tggatggttcagcagtaccctccagagtttagggatcgtccagttctgatcgtccatgga
gataagagggaggccaaggcccggctggtgcaacaggcttcgccttttccacatattcgt
ttctgtcaggccaagctggatattgcttttggaactcaccacacgaagatgatgttgctg
tggtacgaggaaggttttagagtcatcattctgacctccaacctcatcagagctgactgg
taccagaaaacacaagggatgtggatgagcccaatatttccacggttaccaaagggcagc
agtgcgagcgcaggtgagtcgccaaccttctttaagagggacctgctggaatacctggca
gcataccgcgccccagaactggaggagtggatccaacgaatcaaagagcacgacctgtca
gagaccagggtttatttggtcggctcaaccccggggaggtacgtcagctcagacatggag
cgttggggccacctgaggctgaggaagctgttgtatgaccacactgagcctgttcccggg
gaagagaggtggcctgtgattggacagttctcaagcatcggctctatgggactggataag
accaaatggttgacaggggaatttcagcgcaccatgaccacgctggggaaatcctctctt
cgatcagacccccccatgcacttgctgtatccatcagtggaagatgtgaggactagttta
gaaggctatccagcgggaggctctcttccctacagcatccagacggctcagaaacaagtt
tggcttcactccttcttccaccgttggaaggcggatacgacaggaaggagtcacgcaatg
ccacacataaagacatacatgagggcatcaccagattttactcagcttgcctggttcctc
gtcacaagttccaacctatccaaagcagcatggggtgctctggagaaaaacaacactcag
gtgatggttcggtcatacgagctgggggtcctcttcgtgcctgcagcctttaatatgaag
accttccctgtaaacaaaaagccgtttcctgtctcctcctcctcctctggtttccctgtg
ccatttgacctccctcctacatgctactctcctaaagatcagccttggatctggaatatt
ccttatagccaggctcccgacacacacggcaacatctgggttccctcctga

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