Plectropomus leopardus (leopard coralgrouper): 121941413
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Entry
121941413 CDS
T07454
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121941413 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121941413 (taf4b)
03036 Chromosome and associated proteins [BR:
plep03036
]
121941413 (taf4b)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121941413 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
121941413 (taf4b)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121941413 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
121941413
NCBI-ProteinID:
XP_042340145
LinkDB
All DBs
Position
3:161189..205088
Genome browser
AA seq
709 aa
AA seq
DB search
MTTNKVVIEAQKLGSCGEAGDGDTNIQVKIFQVPVITPVQPSTKGGSISAPPKIIFTDHG
HQPSSSTVTVPGCHTSSSSLMVVAKLATAGGVSANSQPQMTKPALSHVTSINQAATPGRT
VVITVPRAAGPQPVPVAPRLPQPAASPQLPANIHIPAGMMLIRSDSGQLMLVSQHALAQA
QRGPRGVSGQAPRTVVPQVSAAAANKSHDKVTVIRMAPPPSFQPAPVQNQKTAVVKVIGV
APKPAVIQTASAVSERGSQPRVQPVGTENKKEPPSTFTQATLGSVKKCKNFLVTLIKLAS
SDSRSANMANNVRELVRSLLEGKLEAEEFTEQLYQELKSTPQPCLVPFLKKSLPAVRRLT
ADSQLFIQQASASTCNSNTLVSSVKQSSTDTGQNLNTGQQVVIQQPRGVTLRPGSTTFTR
SRNYSSRSSRPTPKHTVVQSGKHLTGTFSIKQPFSQDPPHSTKCTFKDSSGSYREDDDIN
DVASMAGVNLREENAQILTTVVGSVVQSCHDQLFLSPNPVLSRILNTGQAFGVTDVGPEV
VALVSHATEVCLRGLLEKLTVMSEQRKAAPKEDLWHVKVSDVRSQLHIMEEVESLKKKRK
EEEERERLLRLARSRSHTEDPQHQQLKQRAKQFQQMEEAELQHRVANQTALAAIGPRRKR
PLEQTEGQVTLLPRQGVQTVTRVMLKDLLVCMEQDHFLCHSLTLYKAML
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaataaagtggttattgaagcccaaaagctggggtcctgtggtgaggcaggg
gatggagacaccaatattcaagtgaaaatatttcaggtcccagtcatcacacctgtgcaa
ccttccaccaaggggggctccatctctgccccacctaaaatcatcttcactgatcatggc
caccaacctagctcctctacagtgacagtcccagggtgtcacacttcctcttcttccctc
atggtggtagcaaagctggccactgcaggaggtgtgagtgctaacagccaaccacagatg
acaaaaccagctttgagccatgtgacctccattaaccaggcagcgaccccaggaaggaca
gtggtgataactgtaccgagggccgcagggccacagccagttcctgtggctcctcggctg
ccacagccggctgcctccccacagcttccagcaaatatccacatcccagcaggtatgatg
ttgatccgcagtgacagcggtcagctgatgctggtatcccagcatgcattggcacaggct
cagcggggaccaagaggcgtcagtggtcaagcacctagaacagttgttccacaggtatct
gcagcagctgccaataaaagtcatgacaaggtgacagtgatcaggatggcaccccctcct
agtttccaaccagcaccagtccagaaccagaagacagctgtggtaaaggtgattggggtg
gctcccaaaccagctgtaatccagaccgccagcgctgtgtctgaacgggggagccagcct
cgcgttcagccggttggcacagaaaacaaaaaggaaccaccttccacattcactcaggcg
accctgggaagtgtcaaaaagtgcaagaacttcctggtgactctgatcaagctggcctcc
agtgactccaggtctgccaacatggccaacaacgtcagagaactagtcaggagtctgctg
gaagggaagctagaagcagaggagttcacagagcagctctatcaggagttgaagtcaact
ccacagccctgcttggtgccttttctcaagaaaagtctccctgcagtgcgtcggctgact
gcagactcccagttattcatccaacaggcctcagcttctacctgcaattccaacactctt
gtttcctctgtgaagcagtccagcacagacacaggacaaaatctcaacaccggccagcag
gtcgttatccagcaacctcgaggagtgactctgagacccgggtcgacgacattcacccgg
tccagaaattacagctctaggagcagcagacctaccccgaaacacacagtggtccagtca
ggaaaacacctcacaggtactttttcaataaagcagccttttagtcaggatccacctcat
tccaccaaatgtacattcaaggacagttcaggatcgtacagagaagatgatgacattaat
gatgtcgcctctatggctggagtcaacctaagggaggagaatgcacagatcttgaccacc
gtggttggctctgtggtgcagtcctgccatgatcagctgttcctctcacctaacccagtg
ctcagccgaatcctaaacacaggacaggcatttggagtgacggatgttggtccagaggtg
gtagctctggtttctcatgccacagaggtgtgtctccgtgggctgctggagaagctgact
gtgatgtcggaacagcgcaaagcagccccgaaggaggatctgtggcatgtcaaagtaagt
gatgtacgctcccagcttcacattatggaggaagtggagagtttaaagaagaagagaaaa
gaagaagaggagagagagagactgctgcgtctggccagaagtcgctcacatactgaggat
ccacagcatcagcagctcaagcaaagagccaaacagtttcaacaaatggaagaagctgag
ctgcagcacagagtggccaaccagactgcactggctgccatcgggcctcgcaggaagaga
cctctggagcagactgaaggccaggtgactctgctgcccagacagggtgttcagacagtg
actcgggtaatgctgaaggacctgctggtgtgtatggagcaggaccacttcctttgccac
tctctcactctgtacaaagccatgctctga
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