Plectropomus leopardus (leopard coralgrouper): 121941674
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Entry
121941674 CDS
T07454
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121941674 (lrba)
Membrane trafficking [BR:
plep04131
]
Endosome - Lysosome transport
Others
Others
121941674 (lrba)
Endosome - Golgi transport
121941674 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121941674 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
SUKH_6
Motif
Other DBs
NCBI-GeneID:
121941674
NCBI-ProteinID:
XP_042340434
LinkDB
All DBs
Position
4:complement(16165406..16393473)
Genome browser
AA seq
2942 aa
AA seq
DB search
MASEETAGAALPGDGKDGRSGAMALNPGVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VGLIQLVLQRISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTSKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHIYNR
WKNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFAYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDFCQPSS
HELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNTIRR
VGTVLQVMHTLKYYYWVINPQDRSGVVPKGVDGPRPNQKEILSLRAFLLLFVKQLIMKDH
GVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGPMVQAFDQRNGIRVIYKLLAS
KSEGIRVQTLKVMGYFLKHLPPKRKPEVMLSHGLFSLLTERLMLHSSQFTMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNSPPSPESMEVRKVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQRRESPGSQSTIRTISGVSQSSETMECVNGP
PAEETAPSTVIELTVDELSQKSPDSATSSTITSSPPEAADGKGHASIIVSNILVGAGDEQ
KLVQESSKGASGDDGKETEATVTQENDKEEKSEDTNKQEPVTETKNADDLKTSVSEQAET
GDTKDSATSASDGAQTPVTDDEKSETNRGESSNSMTEDSLNEAETELPVVSEQQVETDQM
SPESAAYVEDSVQDGASVVSPVSDHTHPSDADDSQEESSYASAVAGEEAEAGKKEDVKHE
DDEGKKDDQERREMKIDGEKDENQEVGEQDKTEESETEETQVSVAESQTPPAETPEQSAT
ESPKDEVKDDQSFSTTETVTAGQQPSDTTPPSTAQEVAAASDSTSPSQPSETTGTTEGET
VSAPTDTSTAASNSDTQKSADSVSKTKEIKIARLDVSNVALDTERLELKETSTTETSQGQ
PAAAAAAGGSSGQQSSTSAPRSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTK
TILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSSSHELENIEPSQGLA
VEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAMAVRNCLECQ
QAQFKHGSEASARSYTAMPSTSMGAAMSAAAQSPVDAVTGGISPVRDLDRLLQDMDINRL
RAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKKHPQRSQSARSTDSGAI
SGGVEVENGVSLRRYDSGIGDDHTSTAASEADLSSSGVTHGPDAISEALSTLSSEVRPSL
PADSKGKNVKDILRSLVSAPADDIMVDPSLLPPAFLGSVGDAARDSSLQFRSFDRSVIVA
PKKVGLTPSPGTSMTVPAATAASVSGGTPMDSVAVVSSGDASQGASADSAATGGQVPASA
SLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELL
IEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRV
ANEAEFILSRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIRAAKYRDHVTATQLIQ
KIVNILTDKHGAWGSSSKSRPREFWRLDYWEDDLRRRRRFIRNPSGSTHSEATLKAAAEH
VADISASEEDILKGKQSIRSQALGNQNSESETSLDGDDDTLSSLEEKDLENLTGPVNLST
SAQLVAPAVVVKGTLSITSSELYFEVDEEEPGFKAIDPKILAYTEGLHGKWLFTEIRAIF
SRRYLLQNTALEIFMANRTAVMLNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATP
KQLFKASNMTQRWQRREISNFDYLIFLNTISGRTYNDLNQYPVFPWVITNYDSEELDLTL
PSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFT
TFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNANTYNLGVM
EDGTVVSNVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRALN
VFYYLTYEGAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTE
QMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFAVNKWHGLTGHQSSTVQ
DQQYQLPVEIDPLIASNMGSHRRQISDLLDQSIQISSQCFVITADNRFIVLCGFWDKSFR
VYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHNSIGES
PGTEFTTPRAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSMNGDLLRTLEGPERCL
RPRLIQSSTEGHCIIYYDKGQFCHFTVNGKLLGHMEVEDSIKAIYLSRDGQYLLTGGDGG
VVSVWQVHNLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQT
RY
NT seq
8829 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggcgctgcgctgccaggtgatgggaaggacgggagatca
ggcgccatggcgctcaaccccggagtgcctatcagggggatcaggatgaaattcgccgtg
ctcgccggcctggtggaagttggggaagtttccaaccgagacattgtggagacggtgttc
aacctgctggtcggcggccagtttgaccttgagatgaacttcatcatccaggaaccggaa
agcattgtgtgcatggtggagctgctggacaaatgtgagcccacctgtcaggccgaggtc
tggagcatcttcacagccatcctcaagaagagcgtccgcaacctgcaggcatgcactgat
gtggggctcatccagctggtgctccagcgcatatccaccacggacagcatgatagcagac
ctgctagtggacatgctgggtgtgctcgccagctacagcatcacagtaaaagagctaaag
cttttcttcagcaaactgcaaggggagaaaggccagtggcctcgtcatgccgtgaagctt
ttgtcagtcctaaagtacatggctcacaggaatggccccgactccttcttcagctttcca
ggaaaaaacgcagctgccatagctctgcctcctatagcgaaatggccataccagaatggg
tttacattccacacatggctccgcatggatcctctcaacaacatcaatgtagacaaagac
aagccttacttatactgtttccgcaccagtaaaggcatgggttactctgcacactttgtg
ggtggctgcttgatagtgacctcattaaaatccaaggggaaaggattccagcactgtgta
aagtacgacttcaaaccgcagaagtggtacatggtgactcttgttcacatttacaaccgc
tggaaaaacagtgaaataagctgctatgtgaacggggagctggcttcctttggagacatt
gcctggtttgtcaacactagcgacacgtttgacaagtgtttcctgggatcgtctgagacg
gcagatgccaaccgtgtgttctgtggacagatgggggcagtttacctgtttggagaagct
ctcagtgctgctcagatcctagctatctatcagctaggaccgggttaccagggcacattc
aagtacaaggctgagagtgacttgctgtttgcggagcatcataagaccttactgtacgat
ggcaagctgtcctcaagtattgccttcgcttataacccccgcgccacggatgcccagctc
tgccttgagtcctccccgaaggacaacgcctccatttttgtccactcaccccacgctctc
atgctgcaggatgtgaaggccgtggtgactcactcagtccagagtggcatacactctatt
ggaggcgtgcaggtccttttccctctgtttgcacagctggatttttgccagccctccagc
cacgagctggacacctctgtctgctgcactttgctgtcctttgtgatggagctcttgaag
aactcagtggctatgcaagagcaggtcctggcctgcaaaggctttctcgtcattggctac
actttggagaagtcttccaaggtgcatgtgacacggcccgtcctggacattgtgctggcc
ttttccagataccttagcaacttgcagaatggcatcttgctgctcaagcagctgtgtgat
cacattctgttcaaccccgccatctggatccatgcccctgccaaggtgcaactgacactc
tacacctacctggcaacagagttcatcagcacagtgaccatctacaacaccattcgcagg
gtgggcactgtactgcaggtcatgcacacgctgaaatactactactgggttatcaacccg
caggaccgcagtggagttgtgcccaaaggcgttgatggtccaaggcccaaccagaaggag
atcctttctttgcgcgcctttctgttgttgtttgtcaagcaactcataatgaaggatcat
ggcgtgaaggaagatgagctacagagtatcctcaactacctccttacaatgcatgaggat
gacaatctcatggatgtactgcagttgttggttgctctgatgtctgaacatcctgggccc
atggtccaggccttcgaccagcgcaatgggattcgtgtgatttacaagcttttggcctct
aaaagtgaaggaataagagtgcagacactcaaagtaatgggctactttctgaaacacttg
ccaccaaagaggaaacctgaggtcatgctgagtcatggccttttctccctgctcaccgaa
cgcctgatgctccactccagccagttcaccatgacgacctacaacgtgctcttcgagatt
cttacagagcagatctgtactcaagtgatccataaacagcatccggaccccgactccact
gtgaagattctcaacccacaaattctgaaggtaatagctgctctgctgaagaactctccc
ccatcccctgagagcatggaggtgcgcaaggtctttctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctctgtgtggcaggagtggatg
ctctctctgtgcttcatcaacccgcgtaacagcgaggagcagaaaatcacagagatggtg
tacgccatcttccgcatcctgctttaccacgccatcaagtacgagtggggcggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtcacctttgagcagcataaagag
aatctgtcccgtatgttccgtcagtaccagcgccgggagtctccaggctctcagagcaca
atcagaaccatctctggtgtcagccaaagctcggagaccatggaatgtgtcaatgggccg
cctgcagaggagacagccccttccactgtcattgagctcacagtggacgagctgtcccag
aagtcccctgactcagcaactagttccactatcacttccagcccaccagaggctgccgat
ggaaagggacacgcatccatcatcgtgtccaacatcctggtcggggcaggggatgagcag
aagttagttcaggagtcttcgaagggggcctctggtgatgatggaaaagagacagaagct
actgtgacacaagagaacgataaagaggaaaagagtgaagacaccaacaagcaggaacca
gtgactgagaccaagaacgctgatgatctaaaaacatcagttagcgagcaggctgaaaca
ggtgacacaaaagactctgctacatctgcgagtgacggtgcgcaaacacctgtaacagat
gatgaaaaatctgaaactaacagaggtgaatcatcaaactccatgacagaagactctttg
aatgaagcagaaacagaactgccagtagtttcagaacaacaggttgagactgaccaaatg
tcacctgagtctgcagcctatgtggaggacagcgtgcaggatggagcctccgttgtgtcg
cctgtcagtgaccacacccacccgagtgatgctgatgacagccaagaggagtcttcttat
gcttcagctgttgctggagaggaagcggaggcaggaaagaaggaggatgttaaacatgaa
gatgatgaaggcaagaaagatgatcaggaacgtcgtgagatgaagattgatggagaaaaa
gatgagaatcaagaggtcggagaacaagataaaaccgaggagagtgaaactgaagagaca
caggtgtctgttgcggagagtcagactcctccagctgaaacgcctgaacaaagtgccaca
gaatcacccaaagacgaagttaaagatgatcagtctttctccacaactgaaaccgtaact
gcaggccaacagccctcagacaccacaccgccctctacagctcaggaggttgcagcagca
tcagactccacctcaccaagtcagccttcagagaccaccggcaccaccgaaggggaaact
gtgtccgctcccacagacaccagcacagccgcctcaaactctgacacccagaagagtgca
gactctgtcagcaagaccaaagagatcaaaattgcccgcttggatgtgtcaaatgtggcc
ttagacacagagagacttgaactgaaggagacctctacaacagaaaccagccaaggccag
ccggcagcagcagcggcagcaggagggtcttcaggtcagcagagcagcacttcggcccct
cgttccaccatgtttcgcatcccagagtttcgctggtcccacatgcaccaacgcctcctc
actgacctgctcttctctatcgagacagatgtccagatgtggaggagtcactccacaaag
acgattttggacttcgtaaacagcagcgagaacgttgtgtttgtccacaacagtattcac
ctcatctcccaggtggtggacaacctcatcatggcgtgtggaggcattttacctctgctc
tctgcggccacctcttcctctcatgaactagagaacattgaaccatcccaaggcttggcg
gtggaggcttcagtcaccttcttacagcgcctcatcaacctcgtggatgttctcatcttc
gccagctccctcaacttcactgagatagaggctgagaaaaacatgtcgtcagggggcatc
ctgagacagtgccttcgccttgtgtgtgctatggcagtgagaaactgtctggagtgtcag
caagcccaattcaagcatggctcagaagcctcagcacgcagctatacagccatgcccagc
acttccatgggagcagccatgtctgcagccgcgcagagtcctgttgatgcagtgacgggt
gggatttctccagtcagagacctggaccggcttctccaggacatggacatcaaccgcctc
agggctgttgtcttcagagatatcgaggacagtaagcaggctcagtttctggcgcttgct
gttgtctacttcatctcagtcctcatggtgtcaaagtaccgcgacatcctggagccccac
aatgacaagaaacaccctcaacgatcccagtctgccaggagcacagatagtggtgccatt
tctggtggagtagaagtggaaaacggtgtctctctccggcggtatgactctggcattggt
gatgaccacacctcaaccgccgcaagcgaggcagacctgtcatcctctggcgtgactcac
ggcccagacgccatctcagaggccctgtctactctgtcctctgaggtcagaccttctctg
cccgctgattcaaagggcaagaatgtgaaggacatcctgcgcagcctcgtgagcgctcca
gctgatgatatcatggtggacccgagtctgctgcctccagcatttctcgggagtgtgggc
gacgcggccagagactcatcactacagttccgctcctttgatagaagtgtcatcgttgca
cccaagaaagtgggcttgacaccatccccaggcacttccatgacggttccagcagccact
gctgcatctgtgtctggtgggacacctatggacagtgtcgctgtagtgtcttctggagat
gcctcccagggcgcctctgcagactctgcagcaacaggcggccaggttccagccagcgcg
agcctgccatctgtccccccactctcccctgtgacccagaacacagcccccaatatgagt
atctcagagcgtctggagcatgctctggagaaggcagctcctctgctgagagagatcttt
gtggactttgcccccttcctctctcggaccctgctgggcagccacggacaagagctcctc
attgagggcacgagtctggtgtgtatgaagtccagcagctcagtggtggagctcgtcatg
cttctgtgttcacaggaatggcagaactccatccagaagaatgcaggtctcgcctttatc
gagctggtcaacgaaggcaggctgctgagtcataccatgaaggaccacctggttcgtgtg
gctaatgaagctgaatttatcctcagtcgacagagggctgaagacatccataaacatgca
gagtttgagtcgaactgtgcacagtacgcagcggagaagcgagatgaggagaaaatgtgc
gaccacctgatccgagcagccaagtaccgtgaccatgtgacagccacacagcttattcag
aagatagtcaacatcctgactgacaaacatggagcctggggaagctcttccaaaagccgg
ccgagggagttctggcgcctggactactgggaggacgatttaaggcggcgacgtcgcttc
atcaggaacccctccggatccactcactccgaggccactctcaaagccgcagccgaacac
gtggctgatatcagcgcatccgaggaggatattctcaaaggcaagcagtccatcaggagt
caggctctgggaaatcaaaactcggagagtgagacatcacttgacggagacgatgacact
ttgtcatcattagaggagaaagacctggagaacctaacaggccctgtaaacttgagcacc
agcgctcagctggtggctccggctgttgtggtgaaaggcaccctgtccatcacctcctcc
gagctctacttcgaggtggatgaagaggagccgggcttcaaggccatcgatccaaagatt
ctagcctacacagaaggtcttcatggaaaatggctgttcacagagatccgcgccatcttt
tccagacgctacctgctgcagaatactgctctggaaatcttcatggctaacagaacggca
gtaatgttgaactttcccgatgcggccacggtcaagaaggtggtccacagtcttcctcgt
gttggggtgggcacgaatttcggccttccacagaccagacgtatctctctggccacacca
aagcagctattcaaagcatccaacatgacccagcgctggcagcgtcgtgagatatccaac
tttgattacctcatctttctcaacaccatctctggccggacctataatgacctaaaccag
tacccggttttcccctgggttatcaccaactatgactcagaggaacttgacctcactctg
cccagcaacttcagagatctgtccaagcccattggtgctctgaacccgaagagggcagca
ttcttttcagaccgatatgagtcctgggaggatgatcaggtgcccaaattccattatggc
acccactattccacttcaagcttcaccctgatgtggctactgcgaatcgagcccttcacc
acatttttcctcaacttccaaggaggaaagtttgatcatgctgaccgcaccttctcctca
gtgtcccgggcatggaggaactgccagagggacacatctgatgtcaaggagctgatccca
gagttctactacctccccgagatgtttgtcaacgccaacacttacaacctgggagtgatg
gaggacggcactgtggtctctaatgtggagctgccaccttgggccaagagcccagaagag
tttgttcgcatcaatcgcctggctctggagagcgagttcgtgtcctgccagctccaccag
tggattgatctgatctttggctacaaacagcagggaccagaagccaccagagccctcaat
gttttctattatctgacctacgagggtgcagtcaatctcagctccatcagcgaccccatg
ctcagagaggctgtggagtctcaaattaggagttttggacagaccccctgccagttgctc
attgagccacacccaccccgaagctcagccatgcaagtgactccgctgatgtttacggag
cagatgcagcaggatgtcatcatggtgctgaagttcccatccaactctcctgtgacccac
gtagcggccaacacccagccgggtctgacgtcaccggccatcatcaccgtcaccgctaac
cgcctctttgctgtcaacaagtggcacggcttgacaggtcatcagagctcaacggtgcag
gaccagcagtaccaacttcctgtggaaattgaccctctgatagccagtaacatgggcagt
catcgccgtcagatctcagacctgcttgatcaaagcattcagatcagctcacagtgtttc
gtcatcacggccgacaaccgcttcatcgttctgtgcggtttctgggacaagagctttcgg
gtttactccactgactcaggcaaactgacacagatagtgtttgggcatcgtgacgttgtg
acgtgtctggctcgctcagagtcgtacatcggaggagactgctacgttctgtcaggctcc
agagatgccaccctgctgctgtggtactggaatggaaagcacaacagcattggagagagc
ccaggcacagagtttaccacaccgcgggccatcctaacgggccacgactgtgaagtgaca
tgtgcaagtgtctgtgctgagctgggtcttgtaatcagtggctgcaaagagggtccttgt
ctgatccattccatgaatggggacctgttgcggaccctggagggcccagagcgctgcctg
cgtcctcgtctcatccagtcctccactgagggacactgcattatctactacgacaaggga
cagttctgtcacttcaccgtcaatggcaaactgctaggacacatggaggtggaggacagc
atcaaggccatttatctgagtcgggatggccagtatctgctgacaggtggagatggaggt
gtagtatctgtctggcaggtccacaacctcaaacagctgttcacctaccccggctgtgac
gcaggaatccgctccatggccatgtcgcatgaccaaaggtgcatcataacgggcatggct
tctggaagtatcgtactcttctacaacgacttcaacagatggcatcacgagtaccagacc
aggtactga
DBGET
integrated database retrieval system
