Plectropomus leopardus (leopard coralgrouper): 121941758
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Entry
121941758 CDS
T07454
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121941758 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121941758 (taf5)
03036 Chromosome and associated proteins [BR:
plep03036
]
121941758 (taf5)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121941758 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
121941758 (taf5)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121941758 (taf5)
STAGA complex
121941758 (taf5)
TFTC complex
121941758 (taf5)
SAGA complex
121941758 (taf5)
SLIK complex
121941758 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
PROPPIN
CDK5RAP3
VPS8_N
LisH_TPL
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
121941758
NCBI-ProteinID:
XP_042340558
LinkDB
All DBs
Position
4:complement(21204204..21212403)
Genome browser
AA seq
746 aa
AA seq
DB search
MAAVQGGLVDAAEEKDIKTEPSNDGCGNNNANEGRLLSASPGSSAPTGSNKSSEEQQTLL
AVLQFLKKNKLTESVEILRREAGLPEDSLDLKAGDSSGTGSGAAAGSVDTEGGGDTSSLL
SRVTSSSSAAAQAPTKAVGEDQPDVNVVLSAYSQQGDPTLYQVYYSGLKKFIESVLDCHR
AELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRVLSSLSKREHMRG
NETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQID
AMSGSLAGEAKREANKTKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSMGSK
SKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDNLPSICFYTFLNAYQGL
TAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTA
SESKILHGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTHF
SPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDRTIRL
WDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDT
IYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELLLGTY
LSKSTPVIHLHFTRRNLLLAAGAYNP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtctggtcgacgcggctgaagaaaaagacataaaaactgaa
ccatcaaacgatggctgcggaaataataatgcaaacgagggaagactgctctccgcgtcc
cccggctccagcgcaccgactgggagtaacaaatcctcggaggaacagcagacgctgctg
gctgtcctgcaattcctcaaaaagaacaaactgaccgagtccgtcgagattttgcgtcgt
gaagcgggattacctgaagactctctggacctgaaggcgggtgactcctccgggacgggc
tccggggctgctgccggcagcgtggacacggaaggcggcggggatacgagctctctgctc
agccgggtgaccagctcatcctccgctgcagcccaggcgccaactaaagctgttggggag
gatcagccagacgtcaacgtggtgctgtcagcttacagccagcagggagacccgacgctg
taccaggtttactacagcggcctgaagaagttcatagaatcagttttggactgtcaccga
gcagagctgtcccaggtcttctacccgctgttcgtgcacatgtatctggaactggtgtac
aacaatcacgaaagtgaggccaaggctttctttgaaaagttcagtggggatcaagagtgt
tactatgaagacgacttgcgtgttttgtccagcctttccaagagggaacacatgagaggc
aacgagactctgctggacttccgcaccagcaagtttgtcctgcggatctcccgcgactct
taccagctgctgaagaggcacctgcaggagcgtcagaacaaccagatctggaacatcata
caggagcacctctacatcgacatcttcgatggcatgccacgcagcaagagccagatcgat
gccatgtctggcagcttggctggagaagccaagcgagaggccaacaagactaaggtttac
tatggactgctgaaggagccagagattgagctgcctcttgacgatgaggatgaggaggcc
gagaatgaggagggtaaacccaagaagaagaaacccaaaaaggacagcatgggctccaag
agcaagaagcaggatcctaatgcaccatcacagaccaggatacctctcccagagctaaag
gattcagacaagctggacaagatcatgtacatgaaggaggccaccaagaggatccgcctg
ggaccggataacttgccctccatctgcttctacacatttctcaacgcttaccagggtctg
actgcagtggacttcacagacgactccagtctgatcgcgggaggcttcgctgactcgacc
gttcgagtatggagtgtcacaccaaaaaagctccgcaaggtcaagtctgcagcagacttg
aatctgatcgacaaagagtctgacgatgtgctggagaggatcatggatgagaagacggcc
agcgagtcaaagattctccatggacacagcggcccggtgtacggcatcagcttcagccca
gacagaaactacctgttatcaagttctgaagatggtacagtccgtctgtggagtctccaa
acatttacttgtctggtaggctacaaaggccacaattacccagtgtgggacacacacttt
tcccctcatgggtactattttgtctccgggggacatgacagagttgctcgtctgtgggca
acggatcactaccagcctctgcggatattttctggtcacctcgctgatgtcacttgcacc
cgcttccaccccaattccaattatgtggctacagggtcttctgatcgcaccatccggctt
tgggatgtcctgaacggaaactgcgtccgcatcttcactggtcacaagggtcctatccac
gcattggctttctctcccaatgggaagttcttggcttcaggagcgactgacggcagagtt
cttctgtgggacattgggcatgggctgatgatcggagagcttaaaggccacacggatacc
atctactcgctcaggttcagcagagacggagagatccttgcctctggctccatggacaac
actgttcgtctgtgggatgctatgaaagcctttgatgacttagagactgatgactttaca
gcagctacaggacacatccatctacaagataactcccaggagcttcttctgggcacctac
ttgtctaaatccacacctgtcatacaccttcacttcacccgcaggaacctgctgttggct
gctggggcatacaatccatga
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