Plectropomus leopardus (leopard coralgrouper): 121941922
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Entry
121941922 CDS
T07454
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121941922 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plep00536
]
121941922 (slit2)
Glycosaminoglycan binding proteins [BR:
plep00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121941922 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
hEGF
EGF_TEN
LRR_1
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
Laminin_G_3
EGF_TGFA-like
EGF_Teneurin
LRR_EndoS
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
121941922
NCBI-ProteinID:
XP_042340863
LinkDB
All DBs
Position
4:33302670..33431408
Genome browser
AA seq
1568 aa
AA seq
DB search
MVGALSPVGPGRSPATARGLLLVAVVVSVLSGGADGQPCPAQCSCTGTTVDCHGQGLRSV
PRNIPRNTERLDLNANNLTKISKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLR
LNRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDG
AFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPR
LGLYTQCMAPPHLRGHNVAEVQKKEFACTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGK
GLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISEIASDAFQGLRS
LNSLVLYGNKITEISKALFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQ
TIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIG
QIKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPDKCRCEGTTVDCSNQKLTKIPD
HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELIL
TSNRLENIHHRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGA
FDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQD
FACEDGNDENSCSPLLRCPAECSCLDTVVRCSNKGLTTLPRGLPKETTELYLDGNHFTQV
PVELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRL
LSLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGP
GDMTDKLLLTTPSKKFTCTGPVDMSIQAKCDPCLSSPCKNDGTCSNDPVHYYRCTCPYGF
KGQNCEEPIHACISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDACEINIDDCEDNDCEN
NSTCIDGINNYTCMCSPEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECTPGYV
GEHCELDYNDCEDNKCQNGGQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHE
CLNGAQCVVMGTDPQCQCLHGYEGERCETLVSVNFVNRESYLQFPSSLLSPETNISLQIA
TDEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASD
QTLSLSIDGGPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSLQHSSGGRNGTSF
HGCLRNLYVNGKLQDLGAGLGMGTTGSGTAQSTTRQWLGHGVEPGCQPCQRGACVQGDCH
PTGHRGFTCTCHPGWTGTLCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCD
EQDQDAANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGDACDREVACRGERVRDVYQRQQ
GYAACQTQEKVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVK
CGCTKCSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccccggccgctccccggcgactgcgcgggggctg
ctgctggtggctgttgtggtgtcggtcctgtccggcggagcggacggacagccctgcccg
gcccagtgctcctgcaccgggactacagtggactgtcacggccaagggctgcgcagcgtg
cccaggaacataccccgcaacacggagaggctggacttgaatgcaaacaacctcactaaa
atctccaaggcggattttgcaggactgaggcatctgcgagtgttgcaactaatggagaac
aaaatcaccacgatcgagagaggagccttccaggacctgaaggagctggagagactgcgc
ctgaatcggaataatctggccgtgttccccgagctgcttttcctgggaacgacgaagctt
tacagacttgatctcagcgagaaccagatccagggggtccctaggaaagccttcagggga
gctgtggagatcaagaacctccagttggactacaaccacatcagctgtattgaagatgga
gctttccgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccgg
ctgtctgtggccagtttcaaccacatgccaaagctcaggacctttcgcctgcactccaac
aacctgcagtgtgactgccacgtggcctggctgtcagagtggctgcgacagcgcccccgt
ctgggtctttacacgcaatgcatggccccaccgcacttgagggggcacaacgtggcggag
gtgcagaagaaggagtttgcctgcacaggtcaccagtcgtcatcgtcttcctcctgcagc
gtgttacagtgcccagagtcctgcacctgcagtaacaacatcgtggactgcagagggaag
ggacttacagaaatacccaccaacctgcctgaaaccatcactgagatacgactggagcag
aacgccatcaaggtgattccagctggagccttttctccttataagaagctgcgcaggata
gacttgagtaacaaccagatatcagagatagcctcggacgccttccaaggtctgcgctcc
ctcaactctctggtgctatacgggaacaagatcactgagatttccaaagcgctgtttgag
ggactgttttctctgcagctattgttactgaatgctaacaagatagcatgtctgcgcgtg
gacgcatttcaggacctccacaacctcaatctgctctcactatatgacaacaagctccag
accatcgccaagggaaccttctcgtcgctaagagccatacaaacacttcacttagcccaa
aatccgtttatctgtgactgccatctgaagtggctggcagactacctgcaggacaatccc
atcgagacaagcggtgcccgctgcaccagcccccggcgcctcgccaacaaacggattgga
caaatcaagagcaagaagttccgctgctcagctagagaacagtatttcatcccaggtact
gaagactaccgcagtaaactaggaggagactgcttcgccgacttggcctgccccgacaaa
tgccgctgtgagggcacaacagtcgactgctccaaccagaaactcaccaaaataccagac
cacatcccacagtacactgccgaactgcgtctgaacaacaatgaattcactgtgcttgag
gcgacagggatcttcaaaaagttgcctcagctgaggaagattaacctgagcaataaccgt
atcactgacatagaggaggggacgtttgaaggagcctctggggtcaatgagttgattctg
acctccaacagactggagaacatacaccaccgcatgctgaagggactcagcggcctccgc
acacttatgctgaggagtaaccgtatcagctgtgtgagtaacagcagcttcgtggggttg
agctcggtgcgtctcctgtcactctacgacaaccagatcacctccatgaaccctggagca
ttcgacacactgcactctctgtccacgctcaacctcctggccaatcccttcaactgtaac
tgtcacctggcgtggcttggtgattggctgaggaggaagcgcatcgtcacaggtaaccct
cgctgccagagtccgtatttcttgaaggagatccccatccaggatgtggcagtccaggac
tttgcctgtgaagatggtaacgatgagaacagctgctctccgctgctgagatgtccagca
gagtgttcctgtctggacactgtggtgcgctgcagcaacaagggcctcaccacgctgccc
agaggcctgcccaaagagaccactgaattgtatctggatggtaaccacttcactcaggtt
cccgtggagctctccaattacaaacacttaacactcatcgatttgagtaacaaccagatc
agcacgttgtccaaccacagcctcagtaacatgtccgagctgcttaccctaatcctgagc
tacaatcgcctgcggtgcatcccagtgagggcgttcgatggactcaagtctctccgcttg
ctgtctctccatggtaacgacatatcactgataccagagggagccttcaaagacctgtca
tcgctctcccacctggctctgggtgccaaccctctgtactgtgactgccacatgcagtgg
ctgtcagactgggtgaagagtggctacaaggagcctggcatcgcccgctgtgctgggccc
ggtgacatgaccgacaaactgctgctcaccacgccatccaagaaattcacctgcacaggt
ccagtagatatgagtatccaggctaagtgtgacccttgcctgtccagcccctgcaagaac
gacggtacctgctcaaatgacccggtgcactactaccgctgcacctgcccctatggattt
aagggtcagaactgtgaggagcccattcatgcctgcatcagtaacccatgccagaatggt
ggcacctgccacctgaaggaaggagaagggagcaacttttggtgtgtgtgtccggagggc
tttgaaggcgacgcgtgcgagatcaacatcgatgactgtgaagacaacgactgcgagaac
aactccacctgcatcgatgggatcaacaactacacatgcatgtgctcaccggaatacaca
ggggagctatgtgaagagaaactggatttctgtgctccagagctgaacccatgtcagcac
gactcaaagtgcattttgacccctcagggatacaagtgtgagtgcactccgggctatgta
ggtgagcactgtgagctggactataacgactgtgaagacaacaagtgtcagaacggaggt
cagtgcattgacgcagtcaacggatacacctgcgtctgtccagagggatacagtgggtta
ttttgcgagttctcacccccgatggtccttcctcgcaccagcccctgtgacaaccacgag
tgcctcaatggggcacagtgcgtcgtcatgggaacggacccccaatgccagtgtcttcac
ggttatgagggcgaacgctgtgagacgctcgtcagcgtcaactttgtcaaccgcgagtcc
tacctgcaatttccctccagtctcctctcaccagagaccaacataagcctacagattgcc
acagatgaggacagtggcgtgttgttgtataaaggggacaatgatcacatcgccatggag
ctgtacaggggacgcctcagggtcagctatgacacgggatcttacccaccctctgctata
tacagtgtggagacagtgaatgatggtagcttccacgctgtggagttggtagcatcagac
caaactttgtctttgtccatcgacggcgggccgcccaaatccatcaactccatcagcaaa
cagtccacactcaacatagattctccgctttacctcggaggtatgccagaacgtgcctct
gcatctgggggtctctcgtccctgcagcatagctcaggtggacgcaacggcaccagcttc
cacggctgcctccgtaacttgtacgtcaacggaaaactccaagacctgggggccgggctg
gggatggggactacgggctctgggactgcacagagcaccaccagacagtggctgggccac
ggggtggagccaggctgccagccttgtcagagaggcgcctgtgtccaaggtgactgccac
cccacagggcatcgtggcttcacctgcacctgccacccgggctggacggggacgctgtgt
gaccagcaagtcaacaacccctgtgacggcaacaagtgtatccacggtacctgccttcca
atcaactcctactcgtactcctgtcgctgccagcctggtttcgctggcgtactctgtgat
gagcaggaccaggatgcagctaacccctgcagtctgtctcgctgtaaacatggcaaatgt
agagtgtcaggcctgggcaaagcatactgcgagtgcaacagcggatatacaggggatgca
tgtgacagagaggtggcctgcagaggggaacgggtccgagatgtctaccagagacagcaa
ggctacgcggcgtgccaaacccaggagaaggtctcccgcctagagtgtcggggcagctgc
ccagggggggcagaaggacagggcacctgctgcacccccctccgcagcaaacgcaggaaa
tacaccttccagtgcactgatggctcttcttttgtccaggaagtggagaaagtggtcaag
tgtggctgtacaaagtgttcctcgtaa
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integrated database retrieval system
