Plectropomus leopardus (leopard coralgrouper): 121941964
Help
Entry
121941964 CDS
T07454
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121941964 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121941964 (zcchc7)
03016 Transfer RNA biogenesis [BR:
plep03016
]
121941964 (zcchc7)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
121941964 (zcchc7)
Transfer RNA biogenesis [BR:
plep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
121941964 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
121941964
NCBI-ProteinID:
XP_042340947
LinkDB
All DBs
Position
4:complement(33945488..34010770)
Genome browser
AA seq
657 aa
AA seq
DB search
MYCAYQEREELEDDLYQEDEEDSEGSEVNSELEFRLYSQLHYSSNAEAIEEQEERGEKAE
GPDSRQQEVPENTADVNEEQEQTGESRPPSPDLSKVLQQPKKKKKKEEEKLAKQKKVKKN
PKAQRSSASVFEEVIVIDSSPDVISISEDDSPDDEEGVCALKAGGLQRLQTSTPAQQGTK
KKSLSEPVTVDSSSSESDSEESKSESDSSDSSDSDGLENWMILGREKQDGDQSISLNLEG
GSDSNTDEEEEESSWLVSSKDKEARIYNKDKGARLTVQRLSNRYYTNKNVECRNCNKTGH
LSKNCPEPKKCSPCFLCGNPGHLSSECPNRHCNNCGLPGHLYDSCSERAYWHKQCHRCGM
TGHFFDACPEIWRQYHITAKTGPPVKQRGEDRGRSPAYCYNCARREHFGHACKWKRMFNG
TYPSTPFINHYDTTDDIKRREYRTRLKVEELRRKGLFTTSPQTPLTPGPPRKKQKISHHK
KNHQTNHTSYQSPNDHKPKSSHIFFNDSHGFVAPKIDKHNTHKQEGTGNVKLWKPKRPVP
TSKDPLPKTKLIIDEDGDFPRGGGKGGNMEKKKKKKKSIRKKKNKIQLGQPDGSKEIRPD
HLQWTATGVMQASTTKTEKGKRNWRSRAQRNADKKLPAQMYATDENLFIIKQRKRKR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtgcgtaccaggaacgggaggagttggaggatgatctctatcaagaggatgaa
gaggactctgaggggtcagaggtcaacagcgagttggagttccgcctctacagccagctc
cactactcctctaatgccgaggccatagaggagcaggaagaaagaggagagaaggccgag
ggcccggacagccggcagcaggaggtgcctgagaacactgcagatgttaacgaagaacag
gaacaaactggagaaagtagacctccgtcacctgatttgagcaaggtactgcagcagcca
aagaagaagaagaagaaggaggaggagaaacttgctaaacagaagaaggttaaaaaaaat
cccaaagctcagaggtcgtccgcatcagtttttgaggaggtcattgtgattgactccagc
ccggatgtcatctccatctctgaggatgactctcccgatgatgaagaaggggtctgtgcc
ttaaaggctggaggcttacagcgactgcagacttccaccccggcccaacagggaaccaag
aaaaagagtctcagcgagccagtgactgtggactccagcagctcagagtctgactcagaa
gaatcaaagtcagagtctgactcgtctgattcttctgactcggatggtctagagaactgg
atgatcctgggtcgagagaagcaggacggagaccagagcatctcgctcaacctggaggga
gggtctgacagcaacacagatgaagaagaagaagagagcagctggttggtttcatccaag
gacaaggaggctcggatctataacaaagacaagggtgccaggctaacggtgcagcggttg
tcaaacagatactacactaacaagaacgtggagtgtagaaactgcaacaagaccggacat
ctctccaagaactgccctgagcccaaaaagtgttcgccctgcttcctttgtggcaaccca
ggccacctgtccagtgaatgtcccaacaggcattgcaacaactgtggcctgcccgggcac
ctctatgattcctgcagcgagagagcgtactggcacaaacaatgccatcgttgcggcatg
acggggcacttttttgatgcttgtccagagatctggagacagtatcacatcacggctaag
acgggtccacctgtgaagcagcggggagaagaccgaggtcggagccctgcctactgctac
aactgtgctaggagagaacactttggccacgcatgtaaatggaagaggatgtttaacggg
acgtatcccagcaccccgttcatcaaccactatgacaccaccgatgacatcaaacgcaga
gaatacaggacacggctgaaggttgaagaacttaggagaaaaggcctttttactaccagc
cctcagacccctctgactccaggacctccaaggaagaaacagaaaatcagccatcacaaa
aagaaccaccagaccaaccatacatcttaccaaagtcctaacgaccacaaacccaaatcc
agccacatattttttaatgacagccatggctttgtagcacccaaaattgataaacacaat
acgcacaaacaagaaggcactggcaatgtgaaactatggaaacccaaaaggccagtgccc
acctcgaaagaccctctcccaaaaactaaactaattatcgatgaagatggtgactttcct
agaggtggaggcaaaggagggaacatggagaagaagaagaagaagaagaagagcataagg
aagaaaaagaataaaattcaattagggcaaccagacggatccaaggaaatcagaccggac
catctccaatggactgcaactggagtgatgcaggcgtcaacgacaaagacagagaaagga
aagaggaactggagaagtcgagcccagaggaacgctgacaaaaagcttccggcacagatg
tacgcaacagatgagaacctgtttatcatcaaacagaggaaacgcaaaagatag
DBGET
integrated database retrieval system
