Plectropomus leopardus (leopard coralgrouper): 121941971
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Entry
121941971 CDS
T07454
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plep04990
]
121941971
Domain-containing proteins not elsewhere classified [BR:
plep04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
121941971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
121941971
NCBI-ProteinID:
XP_042340958
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All DBs
Position
4:complement(16892031..16928458)
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AA seq
1805 aa
AA seq
DB search
MASPTAGRDIPEGSPRDEPELSGSNHPEPACLEAQKWIEAVTGKSFGDKDFRSGLENGIL
LCELLSAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLRGSQLFDPGDLQDTSIRAN
LKDSDCNRKLKNVLNTVFWLGKAASGCASYSGPTLNLKEFEGLLAQMKVESEEGGDGSQK
RSVRDSGYDCWDSERSDSLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRGNSDGRGSD
SEADAPNRRPDVRKDDMLARRTASSDSRSSIPFNQFLPNRTNASSYVPTPRRKPHTEEGE
QRSHPQTTPEQSKRTGPHHKIPKTVTWALENNGEKQEEEKVTQEVLEQRRLQKLEKAGIK
VLPAAVRYSSPPTMEENEVRSPSPNIILRCNNDFLSSQKSVWDSSSDAEEEAEVRKVPDV
RKDDLASRRAHRGPAAPKVHQFVPPPVCSDKDRERWEGIRRASQQTLQEKEISEKEAVPD
IITRRDNPFLNSAPRREEEEDGEEEEEEVMAMPNKQKDDLARRRAQSKPLPHREGPVSFV
SASMSQADMQKWERLKMTEPSEASPAPVCQACLQKNYGSPFSGSAKAGRGHSKVVTFGGV
TEIGQPIDTVTSSEGEETELLRRLLSKATVAMPTIGLGSQLSERERSQVDGADLNQTTPE
TPPTPAELDARLAQYERRSLEEEDEEEEDRIPDLRKDDMMARRTGVFHKQSSTTVTYNRF
LPLPGTKRSTQGEVTTDAAPRNKREVQADRSKKLNVRVEQQPPRVPMETSQLHPEATIIR
AHSEREYDDDEDEYDENEPVPDLEKDDMMARRTGSFQSAARTNQFIKQFLPVPGSVKYNV
APVSAMKPLHSRPKLTEKMANESSIVTVAAEPQTLPSKAPILRKCAGLRERQEETGKQDM
LISSTSVINVTEPLSSPSHTPPLSPAHVQTCKVEAELKKQSVEERAEEKVDDNKKDVNEQ
PRKKPFWLDDDNLPPIMMSRRVAFMSEDTESVSMSDILNEEEVGHLPPLSLSRYERMHEQ
YNNFQEDEDHWQNDLAAWKNRRRSASQELIKKEEERKRMEKRMKEERSESNKRKSIKTYK
EIVEEKERREAELCEAYRNAATPEEAAMVLQRYALRFTISDATLDSLKLPRSTSKPNYDL
HKVDKEHKTTIPDNETSEFPHQPEPAVISDQSHTEPEEMETDPAAQQETSVSVSSSPPSP
VSPLSPVTNSENVPPQPLELKEPQSKPTESPTTHQIQPITGDAKPQTKHTPPQTAQGQPQ
ITQPVHTLPSPSSVSPRPVPLLAAKPYCQPRNTQTGHKAVKMDGLVRVNGETMEDLPAST
PSAPEVRDVPSQPPETNVLLKQMEKDVPHKQLEKDVPSKQTEKDVAVEQMELDVPSKQTE
KDVPCKQTEEDVTPKQMETDVPSKQMETDVPSKQMEMDVPSIQEEKDVPPEKTSTSQEKV
EQTPPPQTERSTSSLGSAISSLIGGRNCTITTTIVTELTHVEPHRPDIQSNGQVNGTSGL
SGSPVEEKKSEPATSPNSMQEYSPTVTEGLEESSVTIETPMLNLAKRVNHWVWDPNEERK
RLESWQQEQERLLQEQYQREQEKLKKEWEKAQLEVEEEERKHNEEERRILEETVTPLNPT
CPLNQTGTTSTAPENNKTEARNVPVQQNGQRSSPGNEDQHASKLHFFQDSASDGEPLKKQ
ELLKTASLDRNPQLNQPHIVKRSESHEAVISKQQTSPSSPQPPSPSRCVSGKRLCSGCSQ
PLGKGAAMIIDTLGLFFHIQCFKCGVCKGQLGDATTGTDVRIRNGVLSCHECYIASRGRG
QPTTL
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccacagcaggtcgagatatcccggagggttcgccgcgggacgagccggag
ctgtcagggtccaaccatcccgaaccagcctgtctggaggcacagaaatggatagaggct
gtaacggggaagagctttggcgacaaggacttccgcagcggattggagaatggcatcctg
ttatgcgagctgctgagtgcaatcaaaccggggctggtcaagaagatcaacagactgccc
acccccatcgctgggctggacaacctgtcagtcttcctgcggggctgtgaggagttgggc
ctgaggggctcacagctgtttgaccccggggacttgcaggacacttccatacgagccaac
ctcaaggactctgactgcaaccgcaaactaaaaaatgtgctgaacacagtgttctggctt
gggaaggctgccagcggctgcgcctcctacagtggccctactctcaacctcaaggagttt
gaagggcttcttgctcaaatgaaggtggagagtgaggagggaggcgacggttcacagaaa
cgcagtgtgagagacagcggctacgactgctgggactctgagaggagtgactctctctct
ccaccacgacacactcgagacaactccctagacagtctggactcctttggctcccgctca
cagcacagcccttctcctgatgtggtgaatcgaggcaacagcgacgggcgaggcagcgac
tcggaggccgatgcccctaacaggaggccagatgtgaggaaggatgacatgttggccaga
cggacagccagcagtgattcaagaagctccattccctttaaccagtttcttcccaaccga
accaacgccagctcctacgttccaactccaaggcgaaaaccacacacagaggaaggagag
cagcgaagtcaccctcaaaccactccagagcagtccaaaagaactggaccacaccacaaa
attcccaaaactgtcacttgggcacttgagaacaatggggaaaaacaggaagaggagaag
gtgacccaggaagtgttggagcagaggaggctgcagaagttggagaaagcaggaattaaa
gttctgcctgctgccgttcgctacagcagccctcccacaatggaggaaaatgaagtgagg
tcaccatctccaaacatcatcctccgctgcaataatgactttttgagctctcagaaatct
gtatgggactcctcctctgacgcggaagaggaggcagaggtgcgtaaagtcccggatgtt
cgtaaagacgacctggcatccagacgagctcatcggggcccagctgctcccaaggtgcat
cagtttgtcccgccacctgtatgtagcgacaaagaccgagagcgctgggaaggcattaga
cgagcctcacagcaaacgctgcaggagaaggagatcagtgaaaaggaagcagtccctgac
atcattacacgcagagacaaccccttcctaaactccgcccctcgccgcgaggaagaggag
gatggggaggaggaggaagaagaggttatggcgatgcctaataagcagaaggatgacctg
gctcgtaggcgggcccaaagtaaacccctccctcacagggaaggaccggtgagctttgtt
tctgcctccatgagccaggcagatatgcagaagtgggagagactcaagatgactgaaccc
agtgaggctagtcctgcccctgtgtgtcaggcttgtctgcagaaaaattatggaagtcct
ttcagcggatcagcaaaggctggacgaggtcacagcaaagttgtgacctttgggggcgtg
actgagatcgggcagccaatagacacagtcacgtcaagtgaaggggaggagacggagttg
ctaagacgactcctttccaaggcaactgtagccatgcctaccattggcctgggctcccag
ctttcagagcgggaacgcagccaggtagatggagctgacctcaatcaaaccacccctgaa
acccctcctactcctgctgagctggatgcacgtctggctcagtatgaacgaagatcgctc
gaggaggaggatgaggaggaagaggacagaatcccagatcttcggaaagacgacatgatg
gcgaggaggacaggagttttccataaacaaagcagcactacagtgacttacaaccgtttc
ctacctctgcctggcaccaagcgctccacacaaggggaggtcaccactgatgctgctccg
cggaacaaaagggaagttcaggcagacagaagcaaaaaactgaacgtcagagtggagcaa
cagccacccagagttcccatggaaacatctcagctgcatcctgaagcgactataatccga
gctcatagtgaacgagaatatgatgatgatgaggatgagtatgatgaaaatgagcctgtg
cctgacctggagaaagatgacatgatggctcgaaggactggatcattccagagtgcagcc
agaacaaaccagttcatcaaacagttcctcccagtacctggatcagttaaatataacgtc
gccccagtgtctgcaatgaagccactacacagcagacctaaactcacagagaagatggct
aatgaaagcagcatcgttaccgtggcagcagaacctcagacgctgccctccaaagccccg
atcctccgtaagtgtgcaggtctgagggagaggcaggaggagactggaaagcaagacatg
ctgatctcaagcacctctgtcattaatgtgactgagcccctctcctccccatcgcacact
cctccactcagtcctgctcatgtccagacttgtaaagttgaggcagagctgaaaaagcag
agtgtggaggaaagagctgaggaaaaggtggatgacaataagaaggatgtgaacgagcaa
ccacgaaagaaaccgttctggctggatgatgataatctacctcccatcatgatgagccgg
cgagttgcttttatgtctgaggacactgagagcgtgagcatgagtgacatccttaatgag
gaagaggtgggacacttaccaccactgagcttatcacgatatgagcgcatgcacgaacag
tacaacaacttccaggaagatgaggaccactggcaaaacgacttggctgcctggaagaat
cggcgtcgcagcgcgtcacaggaactgatcaagaaagaggaagagaggaagaggatggag
aaaagaatgaaggaggagagaagtgaaagcaacaagaggaaaagcattaagacctacaaa
gagatcgtggaggagaaggagcgcagagaggcagagttatgtgaagcctacaggaatgca
gcgactccagaggaggccgccatggttttacaacgttacgctcttcgctttacgatcagt
gacgcaacactggacagcctaaaactgcccagatccacttcaaaacccaattatgacctt
cataaggtggacaaggagcacaaaacaacaatccccgataatgaaacatcagaatttccg
caccaaccagaaccagctgttatttcagaccagagtcacacagaacctgaagagatggag
acagatccagctgctcaacaagagacatccgtctctgtctcctccagtcccccatcacct
gtcagccccctcagccccgtcacaaactcagaaaatgtgccacctcagccactagaactg
aaggagcctcaatctaaaccaacagagtctccgaccactcatcagatacagccgatcaca
ggagatgcaaagcctcaaaccaaacacaccccgcctcagactgcacaaggtcaacctcaa
atcacgcagcctgtacacacactcccctctccttcatctgtgtcccccagacccgtcccc
ctgctggcagccaagccctactgccagcccaggaacacacagactggacacaaagctgtc
aagatggacgggttggtgcgagtgaatggagagacgatggaggatttacctgcttccact
ccatctgccccagaggtcagagatgttccctcacaaccaccagagacaaacgttctcctt
aaacagatggagaaagatgttccccacaaacagttggaaaaagatgttccgtccaaacag
acggagaaagacgttgctgttgaacagatggagttggatgttccctccaaacaaacagag
aaagacgttccctgcaaacagacagaagaggatgttacccctaaacagatggagacagac
gttccctctaaacagatggagacagacgttccctctaaacagatggagatggatgttccc
tccatacaagaggagaaagatgttccccccgagaagacttcgaccagtcaggagaaggta
gagcaaacgccgccaccacagacagaaagatcgacctcgtctttgggctcagccatcagc
tccctgattggaggtcgaaactgcaccatcacgacaactattgtgacggagctcacacat
gtggagccacatcgcccagatatccaaagcaacggacaggtcaacggtacttctggacta
tctgggagtccagtggaggaaaaaaagtcagagccagctacatcacccaacagcatgcag
gaatattcacccactgtcacagaaggacttgaggagagcagtgtgactattgagaccccc
atgttgaacttggctaaacgtgttaatcactgggtctgggaccccaatgaggagcgtaaa
cggctggaaagttggcagcaggagcaggagcgcctcctacaggagcaataccagagagag
caggagaagctgaagaaggagtgggagaaagcacagctcgaggtggaagaggaggaaagg
aaacacaatgaagaggagagaaggatcctagaggagactgtaacgcccttaaatcccacc
tgcccgttgaaccagacagggacgacttcaacagctccagaaaacaacaaaacagaagca
agaaacgtccctgttcagcaaaatggccaaagaagctcccctgggaacgaggatcagcac
gcatccaagctgcattttttccaggattctgcaagtgacggtgaacctttgaagaaacag
gaactgttgaagacggcctctctggatcgcaaccctcagcttaaccagccacacattgtc
aaaaggtccgaatcacatgaggctgtaataagcaaacagcagacctccccttcatcacct
cagcctccctcacccagcaggtgtgttagtgggaagagactatgttctggttgttctcag
cctctgggaaaaggagccgccatgatcatcgatacactgggactgtttttccacatacag
tgtttcaagtgtggagtgtgtaaagggcagctgggtgacgccactacagggactgacgta
cgcattcgtaatggagtgctgagctgtcatgagtgctatattgcatctcgaggcagaggt
cagcccaccacactatga
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integrated database retrieval system
