KEGG   Plectropomus leopardus (leopard coralgrouper): 121942180
Entry
121942180         CDS       T07454                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121942180 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plep03021]
    121942180 (taf5l)
   03036 Chromosome and associated proteins [BR:plep03036]
    121942180 (taf5l)
Transcription machinery [BR:plep03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     121942180 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     121942180 (taf5l)
Chromosome and associated proteins [BR:plep03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     121942180 (taf5l)
    STAGA complex
     121942180 (taf5l)
    TFTC complex
     121942180 (taf5l)
    SAGA complex
     121942180 (taf5l)
    SLIK complex
     121942180 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 DSE1_N Beta-prop_Aladin ANAPC4_WD40 PAC11 Beta-prop_RIG_2nd CFAP251_N Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_NOL10_N RMC1_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 ASA1 Beta-prop_EIPR1 Tricorn_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_like Nbas_N PROPPIN WD_LRWD1 Beta-prop_IP5PC_F PD40 BCAS3_WD40
Other DBs
NCBI-GeneID: 121942180
NCBI-ProteinID: XP_042341252
LinkDB
Position
4:1013334..1018887
AA seq 600 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYEAQYSRLRSFLSETEISWAKEVSSILYPLFVYLHLDMVHCGLKGAVDGFYS
RFHGAFLQDSEQRAIIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRAFSTHLQVEVTASRRTDYQLYGAAGGATTAPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSRIHLACDVLEEEVDEEDGCGSEIKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHVYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
IDNSVRVWDIRNSHGGTPADGSSSELVGMYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgtgttcgcactgagcagatccagtatgccgtggctcagtacctgaagcggagg
cagtatgtcgacaccgacggctccctgaaaggagccaaactcttccagtcagcagaggag
atggcggccagcctcacagtgcagacagagtcggggtgcgccaacatcgtctctgccgct
ccctgtcagtccgaccctcagcagtatgaggctcagtactcccggctgcgctccttcctg
tcagaaaccgagatctcctgggcgaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacatggtgcactgcggcctgaagggggcggtagatggtttttacagc
cgtttccacggagcctttcttcaggacagcgagcagcgcgccatcatcgagcagctccgc
cacgttctcaccgctcaggacgtcgcagccaaccccaagctgagtgctttcttggagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcggtacctgcagagc
gaggacaacagcgccctctgcagggccttcagcacacacctgcaggtggaggtcaccgcc
tccaggcgcacagactaccagctttacggagcagccggcggggcgaccaccgccccgaac
tccacctcctcctgggcgggagtggacggggcggagggcggggagggggtggaggtccct
gcagggatcccacagagcgaggcggccctggaggcgcttcaggactgcatcaagaaggtc
cgcgagggcccccccacgctcaccaccgtgtgtttctacgccttccaccacacggagcag
atgttgaacaccgccgaggtgtccgccgacagccggctgctggccgccggcttcgacagc
tccacggtgaaactgtggagcctccgagccagaaaactgaaggccaaaccgcatcaggcg
gacgtgtcacgcatccacctggcctgtgacgtcctggaggaggaagtggacgaagaggac
ggctgcggcagcgagataaagacgctgagaggtcacagtggccccgtgtttcgtaccgcc
ttcctgacggacagctccggcctgctgtcctgctccgaggacacgaccatccgttactgg
gacctgggcagcttcaccaacacggcgctgtaccagggacacgtctacccggtgtgggac
gtggacgtcagcccctgcagcctttacttcgccagcggctcccacgaccgcaccgcccgt
ctctggacgttctcccgcacctacccgctgcggctctacgccgggcacctcgccgacgtc
gactgtgtcaaattccacccgaactccaactacctggccaccggctccacagacaagact
gtgcgtctgtggagcacccagcagggggcgtctgttcgcctcttcaccggccaccgtggc
cccgtgctgtctctcgctttctcacctaacgggaagtacttggcgtccgccggcgaggac
cagagggtgaagctgtgggacttagcatctgggacgttgttcaaagacctgcggggacac
acggacagcgtcaccagcctgtctttcagcccggacagcagcctggtggcgtcctcgtct
atagacaactcggtgcgggtgtgggacatccgaaactcccacggcgggacgccggctgac
ggctcgtccagcgaattggtgggaatgtacactggaaacaccagcaacgtgctcaacgtc
cagttcatggcctgcaacctgctgctggtgacggggacggcgcaggagaaggcagagcag
tga

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