Plectropomus leopardus (leopard coralgrouper): 121942201
Help
Entry
121942201 CDS
T07454
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121942201 (lrrtm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_14
LRR_LRWD1
LRRNT
LRR_EndoS
DUF4750
HemY_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
121942201
NCBI-ProteinID:
XP_042341276
LinkDB
All DBs
Position
4:complement(11305112..11307195)
Genome browser
AA seq
525 aa
AA seq
DB search
MLMDFLLIGLYLKWPLKKPPGLILCLLGIFLRTVPLVEGVCPRLCRCDSKLLYCEGLNLT
DIPRNLSSAMGLSMRENNLTELREGQLVGLSQLTWLYLDHNNIDIVEEGAFDRLRRVKEL
DLSSNRIESLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNALKFVPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMHNNRATVVVNTLDWTWHFLEKIDLSANEIEYIEPHVFESAPNLKLLMLDSNRLTSVDQ
RILDSWSSLDSITLAGNDWECSRNVCALASWLSAFRGQRDNSLLCSSPDTAQGEDVLDAV
YAFQLCEDPTMEVTTAGLYASTRDLAQGGSVFLGPFTPNPYEGEGSEVVTSSFTVTVGHD
DLESTMQIHKVVTGTMALIFSFLIIVLMLYVAWKCFPAGIRQLRQCFSSQRRKQKQKQSM
QQMAAISTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggactgtacttaaagtggccactgaagaagccccct
gggttgatactgtgtttattggggatttttctaagaacggttcccttggtagagggggtt
tgtccaaggctgtgccgctgcgacagcaagctgctgtactgcgaggggctcaacctcaca
gacattccccgcaatctgagcagtgccatgggcctgtccatgagagagaacaacttgacc
gagctgcgtgaaggccaactggttggtctgtcacagctcacctggctctacctagatcac
aacaacattgacattgtagaggaaggtgcatttgacaggctaagacgggtcaaggagtta
gacctcagcagcaaccggatagagagtctgccaaatggtacctttaggcccctccccaac
cttcgtatcctggacctctcgtacaacaggctgcaggcactagagcctgacctgttccac
ggccttagaaagctcaccaatttgcatttgcgctacaatgctctcaaatttgtgccagtg
cggatttttcaagactgccggagcatgcagtttctggacttgggatacaaccaactgcag
agcctggcacgaaactccttcgccggcctcttcaagttgactgagttgcatcttgagcac
aatgagctggttaaagtcaacctagcccacttccctcgcctcatctctttacgtactctg
tacatgcacaacaatcgtgccactgttgttgtcaatacactggactggacatggcatttt
ttagagaagattgacctatcagccaatgaaatcgagtacattgagccacatgtttttgag
agcgcacctaacctcaagctgctgatgctagactccaatcggttgacctctgtggaccag
cgcatcctggattcatggtcatctctggacagcattaccctggcagggaatgactgggag
tgcagtcgcaacgtgtgtgccttggcctcttggctgagtgccttccgaggccagcgtgac
aattccctgctgtgttcaagccccgacaccgcacagggcgaggatgtgttggatgctgtc
tatgcttttcagctatgtgaggatcccacaatggaggtaactacagcgggcctgtacgcc
tcgacaagggatctggcccagggtggttccgttttcctgggcccatttacccccaaccct
tacgagggtgagggtagtgaggtggtcaccagttctttcaccgtcacagtgggccatgat
gacctagagagcaccatgcagatccacaaggtggtgactggaaccatggcactcatcttt
tcctttctcatcatcgtgctcatgctgtatgtggcatggaagtgctttccagccggaata
agacaactgaggcagtgcttcagcagtcagcgccgtaagcagaagcaaaagcaaagcatg
cagcagatggctgcaatttctacgccggagtactatgttgactataaacccaaccacatt
gagggagctctggtaatcatcaatgaatatggttcttgcacttgccaacagcaaccttct
cgggagtgtgaggtgtga
DBGET
integrated database retrieval system
