Plectropomus leopardus (leopard coralgrouper): 121942206
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Entry
121942206 CDS
T07454
Symbol
palb2
Name
(RefSeq) uncharacterized protein palb2
KO
K10897
partner and localizer of BRCA2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03440
Homologous recombination
plep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121942206 (palb2)
03460 Fanconi anemia pathway
121942206 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121942206 (palb2)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121942206 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
121942206 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
121942206
NCBI-ProteinID:
XP_042341280
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All DBs
Position
4:20057216..20066598
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AA seq
1413 aa
AA seq
DB search
MDIPAVPLPSEQDGELCGDILHCEEQLRTTLHCDDKEKLRRKLALLQREYLRTAERLQRA
ERLDAVRRHVRSRISQQDQRDTEVTSNPHLSLSSLIPNTTNGTDTGVAECLGHTGGPANP
DNSRRNQVIKFLLPTDTACTQTANPSHDAARGHRNSPALRLRSRRSRLRLERRSAEAGRS
TDDNSEEGSGQSERVENIRRGGSEERAKTEETEVVNESEELFSCTDSESPSLLLSHWNTC
GQTERGDIAEKEIQGQPEQREKETELGAEGRKESDSTSLLLRCRTAAVNTEGRERDGTQN
GRGREIEGGGEAENRRQQRLFEDSSNKDTEQNTTEKIETENCHDNTAEIKEEKGEMVGGE
HDVKAVSLLDSCTLVEGLLFPAEYYVRTTRRMSSSQSQPDMQAVILSQLNIGRHRRGRGR
GRGRGRGRGRGRGRGQGSNRHTNDHECSDQHTQTQSPGPHMESHSANTSAELNSQSSSGI
SDQNSACQIDVDACYSPTVTTAHPARGRRRRRGRGRGRPQPLQRSVSLDTHQLGLGQTSD
DPQPTSPFISSSPSLHLSDAPQPCLTQGEAVPVQDDPPPASTHSAETQRSSGVNRAQSSS
ASGHLEKVYPIFQKSRSNGSTQMSKDAANWRSLLLPSSSPTQSSLLPLPTLSPNPLMNFD
IPQDFHLPDDQFASLKLHKLRQAAVDSGVEHFPSPSRNTRRNSWRSPVMRVPPPLCLTPT
ITNSPNPTEATQAATESTDLQNMSEEHGPTKWSFCRDITEIPLEQQTDNLHPECQTHTIS
TESVSVAQDPSRDTVTVNIDKSQPHINFADSPAGKENDDVIERSDGLQIKESSVILFEEQ
TDYPVVLRPLEDRWCKHLQTEDKAFIKTLSCEGPLQETPEEPSTSCTAAQLCNDSEAPGD
HLNAAQDSNESSKPTASPPRDRLVDNKNPDPCVPRHSQLLMSPVASAPFTTPHLPASALL
TSPTLPSLGLTPHLIAAALPLTSSPNAPCLTLPPPHSPSTQALSPPALSPCPSITSLPPS
QPSASPAGQIQASSDPPNCLAVSSTQSQGSGGRVESEEEHMMRCRHTLKAPAGGCLVDAC
CLPGSSGGLCVAAAGKWAVCLWSQTSAFDWSLTHTWAFNEPVISVFSVPDAAGLMCVTLG
QLEIREVRMLSCSSLLQVLLCEDVVQAVIGVPKSRVVTSSHSASGSSLQVFTLSDSGSTL
SSQSLVCPGVCVGALAPVDGLSDALIGSDEGGRLFIWNLKTGQLLQKIILGDVLSNTACL
RGYSHCGVLFVLLQHQFLSSLEEEEKEATAKEQMFLKKGKEEERKKTPLFSSVAVNPLSG
KSFLASRLYSPKSWSGRLCEADVNGSMVLGLSQSGCVCVWELGCREASRMVWAPESEGWQ
LARWGGGGTLVTGHHNGDVSLHCYSTSQTSICR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggacataccggcggtgccactgccgagtgagcaggatggagagctatgtggagatatc
ctgcactgtgaggagcagctgaggactacactgcactgtgatgacaaggagaagcttcgt
aggaagttggcactgttgcaaagggagtacctcaggacagccgagagacttcagcgtgct
gagcgtttggatgcagtcagaagacatgtgaggagccgaatcagtcagcaggaccagaga
gacacagaggtgacatctaacccccatctgagcctatcttcattgataccaaacaccacc
aatgggacagacacaggtgtagctgagtgcctgggacacactggaggtccggcaaatcct
gataactccaggaggaaccaggtgatcaagttcctgctccccactgatactgcttgcaca
caaacagcaaatcccagccatgatgcagctagaggtcacagaaacagccctgcactgcgc
ctcaggtctcgccgtagccgcctgcgcttggagaggaggagtgctgaggctggcaggagc
acagacgataacagcgaggaaggatctgggcagagtgaaagggtggagaatattagaaga
ggaggaagtgaagagagggccaaaacagaggaaacagaggttgtgaatgaaagtgaagaa
ctattttcttgtacggactctgagtctccctctttgttgctttcacactggaacacttgt
ggacaaactgaaagaggagacattgcggagaaagagatacaaggacaaccagaacaaagg
gaaaaagagactgagttgggagctgaagggagaaaagaatcagattcaacatctttgctg
ctaagatgtcggaccgctgcagttaacactgaaggaagagaacgagatggcacgcagaac
ggaagaggaagggagatagagggaggaggggaagctgagaatcgtagacaacaaaggctg
tttgaagacagcagtaacaaagatactgaacaaaacacaacagagaaaatagaaactgaa
aattgtcatgataacacagctgaaattaaagaggaaaaaggtgagatggttggaggagag
catgatgtaaaggctgtgagtctcctggactcctgtaccctggtggagggactacttttc
ccagcagagtactacgtccgaaccacaagacgtatgtcgtcttcacagagccagcctgac
atgcaggccgtcatactctcccagctgaacataggacgacatcgcaggggccggggacgt
ggccggggacgtggccggggacgtggccggggccgtggccgtggccaaggatcgaataga
cacacaaacgaccatgaatgttcagatcaacacactcagacacaatcaccaggtcctcac
atggaatcacattctgctaatacatctgctgagcttaacagtcagagctccagtgggatt
tcagatcaaaactcagcttgtcagatcgacgtggatgcttgttattctcccacagtcacc
actgctcacccagcaagaggtaggaggagaagaagaggcaggggcagggggagacctcag
cccctacaacgctctgttagtttagacacccatcaactcggccttggacaaacctcagat
gatccccagcccaccagtcccttcatctcttcctccccgtctctccatttatctgatgca
ccacagccctgtctcactcaaggagaagctgttccagtgcaggatgaccccccgcctgca
tccacccacagcgcagagacacagcgttcttctggagttaacagagctcagtctagctct
gcctccggacatctggagaaggtctatcccatctttcaaaagagcaggagtaacggatcc
acacagatgagtaaagatgctgcaaactggcggtctctcctcttgccctcttcttcacct
acccagtcctctctgctccctctccccactctgtcccccaacccgctgatgaactttgac
attccacaagattttcatctccctgatgaccagtttgcctccctaaagctgcacaagctc
cgccaagctgctgtggattcaggagtcgaacattttccatcgccgtcccgcaacacacgc
aggaacagctggcgcagcccagtgatgcgtgttccgcctccgctctgcctcacgcccaca
atcacaaactcccccaatcccactgaagcaacacaagctgcaacagagtccacagacctt
caaaacatgtcagaagaacacgggccgactaaatggtcattctgtcgagatattacagaa
attcctttagagcagcagactgacaaccttcacccagagtgtcagactcacaccatctca
acagaatctgtgtcagtggctcaagatccttcgagagacactgtgactgtaaatattgac
aagtcacagcctcacatcaactttgcagacagccctgcaggcaaggagaatgatgatgtg
atcgagcgctcagatggacttcaaataaaagagtcttctgtcattttatttgaggaacaa
acagattatcctgttgtacttcgtcccttggaggatcggtggtgtaaacacctccaaacg
gaagataaagcttttatcaagactctgtcctgtgaaggccctctacaggaaacccctgag
gagccttctaccagctgcaccgctgcacagttatgtaatgacagtgaagctccaggagac
catctgaacgctgctcaagattcaaatgaatcctccaaacccactgcaagtccccccaga
gacagattggtggacaataaaaatcctgacccgtgtgtaccgcgccactcgcagctcctg
atgagccctgtggcatcagcacccttcacaactccacacctgcccgcctctgctctcctc
accagccccacgctaccttcactaggactcacccctcaccttatcgctgctgccctccct
ctgacctcctctcccaacgccccatgtctcaccctgcctcctccacacagcccgtccacc
caggcactctcccctccagctctctcgccctgtccatccatcacttccctccctccgagc
cagccatccgcctcccccgccggtcaaatccaggcttcatctgatcctcctaactgcctg
gctgtctccagcacgcagtcacagggctcaggagggcgggtggaatcagaagaggaacac
atgatgagatgcagacacacattaaaggccccagcaggaggctgtctggtggatgcgtgc
tgtctgcccggatcctcaggtggtttgtgtgtcgcagcagctggaaagtgggcagtgtgt
ctctggagtcagacttcagcttttgattggagcttaacacacacctgggccttcaatgag
cctgtgatcagtgtgttttccgtgccggatgctgctgggctgatgtgcgtgactctgggt
cagctggaaatcagagaagtgaggatgctgtcgtgctccagcctcttacaagtgctgctc
tgtgaggatgtggtccaggctgtcattggtgtgcccaagtccagagtggtgacctcctcc
cactcagcatctggttccagcctgcaggtgttcacgctgtcagacagtggcagcacattg
agctctcagtctcttgtgtgtcctggtgtttgtgtcggggccctcgctcctgtggatgga
ctttcagatgctctgatcggctcagatgagggtggacgcctctttatctggaacttaaaa
acgggacagctgctgcagaaaatcatcctcggagatgttttatcaaacacggcgtgtctc
cgaggatactcccactgtggagtgttatttgtcctgctgcagcaccagttcctcagctcc
ctggaggaggaagaaaaagaggccacggcaaaagaacaaatgtttttgaagaagggaaaa
gaagaggaaaggaagaagacccccttgttctcctcggtcgccgttaaccctctgagtggg
aaatctttcctggcttctcggctgtattcgcccaaatcctggtctggcaggctgtgtgaa
gctgacgttaacggctccatggtgctgggcctgagtcagagtggctgtgtgtgtgtgtgg
gagctcgggtgcagggaggcctcgaggatggtgtgggctcctgagagtgaaggctggcag
ctggctcgatggggcggaggaggtacgctggtgactggacatcacaatggagacgtatct
ctacactgctacagtactagtcagacttcaatctgtcgctaa
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