Plectropomus leopardus (leopard coralgrouper): 121942411
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Entry
121942411 CDS
T07454
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plep03037
]
121942411 (pkd2)
04040 Ion channels [BR:
plep04040
]
121942411 (pkd2)
Cilium and associated proteins [BR:
plep03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121942411 (pkd2)
Ion channels [BR:
plep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121942411 (pkd2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
121942411
NCBI-ProteinID:
XP_042341543
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All DBs
Position
4:14418516..14431345
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AA seq
900 aa
AA seq
DB search
MSSSRVRPQQLPQSQPGRSPHRLDSSEGIEMENIQHQDLGLGGVIGTPSPPSRQAWSRDN
PGFEPEDEIMEADWPPASPGRRSVSTASSSSCSSGLGSYTGAGSSTHIPRGGLYPTPTVD
ARQQDRHDHRSCMKQILQKIRILWGTELMEDSDSSRERYLRNVLREMMTYIAFLITICIL
TYGMVSANMYYYTKVMSQLFLDTPLSAGDTATFRSLSTMEDFWKFTEGPFLKGMYWEVWY
NNKSLPENQSLIYYENLLLGVPRLRQVKVRNESCSIHEDLRDEVQDCYNMYTPTNEDTAS
FGPKNGTAWVYTAESEMGGSGYWGQVSKYGGGGYYQDLSRTKEESEAQLQFLKDHLWLDR
GTRAVFLDFSVYNGNINLFCIARLLVEFPATGGVVTSWQFQTVRLIRYVSSWDYFVGLCE
VAFCLFILYYVVEEVLEIRIHRLHYFKSLWNCLDVLIVVLSVVAIIMNITRTAMVSNLLK
GLLENHTAHPSFEPLANLQVQFNNVAAVIVFFSWVKLFKFINFNKTMSQLSGTMSRCAKD
LVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANPVL
GPIYFTTFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLR
LKKTAVDDISDSLRQAGGKLNFDELRQDLKGKGHTDAEIQAIFAKYDHDGDQELTEHEHQ
QMRDDLEKEREDLELERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSY
EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLGRLLDGVMEDERAGR
EIDAQMERLVREELERWESDDMASQVSHPQPATPVGPRPRPSSSLSTDGLDASTNGSSHV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatcccgagtccgaccgcagcagctgccgcagagccagcctggcaggtcgccg
cacagactcgactccagcgaagggatagagatggagaacatccaacatcaagacctcggt
ctcggaggagtcataggcaccccgtccccgccgtccagacaagcgtggagtcgggacaac
ccgggttttgagcccgaggatgagattatggaagccgactggcctccagcgagtcccggg
aggaggtcggtgtctacggcttccagcagcagctgcagcagcggcctgggcagctacacc
ggcgcgggcagcagcacccacatcccccgaggaggactgtacccgaccccgactgtggat
gcccggcagcaggacagacatgaccaccgcagctgtatgaagcagatactccaaaaaatc
agaattctgtggggcacagagctgatggaggacagtgacagcagtcgagagaggtactta
aggaacgtactgagggagatgatgacatatatcgcattccttatcaccatttgtatcttg
acctatgggatggtgagcgccaatatgtactactataccaaagtcatgtctcagcttttc
ctggacacaccgctgtctgccggggacactgccacttttagaagcctctcgaccatggag
gatttctggaagttcacagagggacctttcctcaaaggcatgtactgggaggtgtggtac
aacaacaagagtctgccagagaaccagagtctcatctactatgagaacctcctcctcgga
gtgccgcggctccgacaggtcaaagtacgcaacgagtcctgctccatccatgaagatctg
agagacgaggttcaggactgctacaacatgtacaccccgaccaatgaggacacggcctcc
ttcggacccaagaatggaactgcgtgggtgtatacagcagagagcgagatgggtgggagc
ggttattggggccaggtatctaaatacggaggcggaggatactaccaagacctatctcgt
acgaaagaggagtccgaagcccagctgcagtttctcaaagaccatctgtggctggacaga
ggcaccagagcggtgttcctcgacttctctgtctacaacggaaacatcaaccttttctgc
atcgccaggttgttggtggagttccctgccactggtggagtggtgacctcctggcagttc
cagacagtgcgtctgatacgttatgtgtccagctgggactactttgtgggcctgtgtgag
gtggctttctgtctcttcatcctctactacgtggtggaggaggtgttggagatccgcatc
caccgcctgcattacttcaagagcctgtggaactgcctggatgttctcatagttgtgttg
agtgttgttgctattataatgaacataaccagaacagccatggttagcaacctgctaaaa
ggcctgttggaaaatcacactgctcaccccagctttgagcctctggccaacctgcaggtc
cagttcaacaatgtggctgcagtcatcgtcttcttttcctgggtcaagctttttaagttc
atcaacttcaacaagacaatgagtcagctgtccggcaccatgtctcgctgtgccaaggac
cttgtgggatttgccatcatgttcttcatcatcttcctggcgtacgctcagctcgcctac
ttggtgtttggaacccaagtcaacgatttcagcaccttccaggccagcatttttactcag
ttccgtatcattctgggagactttgagttctcagaaatagaggaggcgaatccagtgctc
ggacccatctactttacaacctttgtcttcttcattttcttcattctcatgaacatgttc
ctggccatcatcaatgacacgtactctgaggtgaaagccgacatgtcgcagcagaggtct
gagatggaaatgaccgatctaattaagaagggttgtaacaaagctctgatgaagttaaga
ctgaagaagacggcagtagatgacatctccgacagtttgcgtcaggctggcggcaaactg
aactttgatgaactccgccaggatcttaaaggaaagggccacacggatgcagagatccag
gccatctttgccaagtacgatcacgacggcgaccaggagctgacggagcacgaacaccag
cagatgagagacgacctggagaaagagagagaggacttggagcttgaacgcaattcactg
actcgacccagcagcgggcggagcttccctcgtacccaggacgactcggaggaagacgat
gacgaggatagcggccacagctctcgacgtcgcggcagcagctcagggggcgtctcctat
gaggagtttcaagtgctggtgagacgtgtggacaggatggagcactcaatcggcagcatc
gtgtccaagatagacgctgtgatcgtgaagctggagaccatggagagagcgaaactcaaa
aggagagatgtgctgggccgactgctggacggagtcatggaggatgagcgtgcaggacgg
gaaatagacgctcagatggagcggctggtgagggaggagctggagcgttgggagtctgat
gatatggcctcacaggtcagccacccacagccagccactcctgtcggcccacggccccgc
ccgtcctcctccctgtccaccgacggcctcgacgcaagcacaaacgggagcagccatgtg
tga
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