Plectropomus leopardus (leopard coralgrouper): 121942833
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Entry
121942833 CDS
T07454
Symbol
supt5h
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121942833 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121942833 (supt5h)
03019 Messenger RNA biogenesis [BR:
plep03019
]
121942833 (supt5h)
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121942833 (supt5h)
RNA polymerase I system
121942833 (supt5h)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
121942833 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF150_C
DUF3912
Ribonuc_P_40
DUF6406
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
121942833
NCBI-ProteinID:
XP_042342037
LinkDB
All DBs
Position
5:645223..678760
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AA seq
1082 aa
AA seq
DB search
MSDSEDSDFSDNQSERSSDGEAEEVEENEEETGSPVGSDKVAEEEGEDLEDEEDYDEEEE
DDDERPRKKPRHGGFILDEADVDDEYEDEEDQWEEGAEDILEKEEAEVSNIDHVVLDEDH
SGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEQXLLGGSEELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVKAA
IEGIGNLRMGLWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEP
SQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPTQRLFDAEKIRSLGGEVSHDGDF
MIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGKEREHN
LQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVK
VIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGEL
VQLDPQTVGVIVRLERETFQVLNMHGKVMTVRHQAVNRRKDNRFAVALDSEQNNIHVKDI
VKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNFTV
GGFAPMSPRISSPMHHGGGSSPQRGGGGGGGXGAGRGRRDNELIGQTVRISQGPYKGYIG
VVKDATESTARVELHSTCQTISVDRQRLTTMGAKRHSGMTSTHGRTPMYGSQTPMYGTGS
RTPMYGSQTPIHEGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEEYDFGYDD
EPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSY
QPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGG
YNPHTPGSNIEQGSSDWVTTDILVRVKDSFMDLMGQTGVIRSVTGGMCSVFMQESEKVVS
ISSDHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL
EH
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgaggacagcgacttctccgacaaccagagcgagcgcagcagcgacggg
gaggcggaggaggtggaggagaatgaggaggagacgggaagccccgtgggcagcgacaaa
gtagcagaagaggagggggaggacctggaagatgaggaggattacgatgaagaggaggag
gacgacgatgaacgtccccggaagaagccgagacacggagggttcatcctggacgaagcc
gatgtggacgatgagtatgaggacgaggaggatcagtgggaggaaggagctgaagacatt
ctggagaaagaggaggctgaggtgtccaacatcgaccacgtggttctggatgaagaccac
tctggatccaggaggctgcagaacctctggagggactccagagaggaggcgctgggtgaa
tactacatgagaaagtatgctaagtcctcgggaggcgagcagtgattactcggagggtcc
gaggagctctctgatgacatcactcagcagcagctacttcctggagtcaaggatcccaac
ctgtggacggtcaagtgtaagatcggagaggagagggcgacggccatcgcgctgatgagg
aagttcatcgcctaccagttcaccgacacacctctgcagatcaagtctgtggtcgctccg
gaccacgtcaaaggttacatctacgtggagtcgtacaagcagacgcacgtcaaggcggcc
atcgaaggcatcggcaacctacggatgggcctctggaaccagcagatggtccccattaaa
gagatgacggacgtcctcaaggtcgtcaaagaggtcaccaacctgaagcccaagtcctgg
gtccgtctgaagagaggcctgtacaaagacgacatcgctcaggtggactacgtggagccg
agtcagaacaccatctctctgaagatgatcccccgaatcgacctggaccgcatcaaggcc
aagatgagcctgaaagactggttcgctaagaggaagaagtttaagaggcccactcagagg
ctgtttgatgctgaaaagatcaggtcactcggaggggaggtcagccacgacggagacttc
atgatctttgaggggaaccgttacagccgcaaaggcttcctgtttaagagcttcgccatg
tctgctgtgatcacagacggagtgaagcccactctgtcagagctggagaagtttgaggac
cagcctgaaggaatcgacctggaggtggtcacagagtccggtaaggagcgtgaacacaac
ctgcaggctggtgataacgtggaggtgtgtgagggagagttgatcaacctgcagggaaaa
atcctcagtgtggacggcaacaagatcaccatcatgcccaaacacgaagacttaaaggac
cccctggagttcccggctcacgagttgagaaaatatttccggatgggcgaccacgtgaag
gtgatcgccgggcgatacgagggcgacacgggcctcatcgtcagagtggaagagaacttt
gtcatccttttctctgacctcaccatgcacgagttgaaggtgttgcccagagacctgcag
ctctgctcggagacggcgtccggcgtggatgcaggagggcagcacgagtggggcgagctg
gtccagctggaccctcagaccgtcggagtcatcgtccggctggagagggagacatttcag
gtgttgaacatgcacgggaaagtcatgacggtgcggcaccaggcggtcaaccgcaggaag
gacaaccgctttgccgtggctctggactcggagcagaacaacatccacgtaaaggacatc
gtcaaggtcattgacgggccgcactcgggccgtgaaggtgagatccgtcacctgttccga
ggcttcgccttccttcactgtaagaagcttgtggagaacggaggcatgttcgtctgtaag
gccagacacctggtgctggctggtggatccaagcccagagacgtgaccaacttcaccgtg
ggaggattcgctccgatgagccctcgcatcagcagccccatgcatcacggaggaggaagt
tctccacagagaggaggaggaggaggaggagganatggggcgggccgaggacggagagac
aacgagctgattgggcagacggtccgcatctcccagggtccttacaaaggttacattggt
gtggtgaaggacgccacagagtccacagccagagtggagctgcactccacctgccagacc
atctctgtggaccgacagcgcctaaccaccatgggagccaagagacacagtgggatgacg
tccacccacgggcgcactccaatgtacggctcccagactcccatgtacggcaccggctcc
agaacgcccatgtacggctctcagacgccgatacacgagggaagtcgtacgcctcactac
ggctctcagaccccgctgcatgatgggagcaggacgccagggcagagcggagcctgggac
cccagcaaccccaacacaccctccaggaacgaagaagagtacgactttggctacgacgac
gagccgtctccgtcccctcagggctacggagggacccccaacccccagacgccaggttac
ccagaagtcccctctccacaggtcaaccctcagtacaaccctcagacacctggcacgcct
gctatgtataacacagagcagtactctccctatgcggccccgtccccgcagggctcctac
cagcccagtcccagtcctcagagctaccaccaggtggcgccctcaccggtcggttaccag
aacacacactctccagccagctaccaccccacaccttcccccatggcctatcaggcgagt
cccagtcccagtcctgtgggctacagtcccatgacgcctggagcgccctctcctggaggg
tacaaccctcacaccccgggctccaacatcgagcagggcagcagcgactgggtgaccacc
gacatcctggtgcgggtcaaggactccttcatggacctgatggggcagacgggggtcatc
aggagcgtcacgggagggatgtgttcagtgttcatgcaggagtcggagaaagtggtcagt
atcagcagcgatcacctggagcccgtcactcccaccaagaacaacaaggtgaaggtgatc
ttgggggaggaccgcgaggcgacggggatcctgctgagcatcgacggagacgacggcatc
gttcgcatggagctggacgaccagctgaagatcctcaacctgaggttcctgggacggctg
gagcactga
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