Plectropomus leopardus (leopard coralgrouper): 121942837
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Entry
121942837 CDS
T07454
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121942837 (smc4)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
121942837 (smc4)
Condensin II
121942837 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
APG6_N
AAA_29
TPR_MLP1_2
Laminin_II
NDC80_loop
ERM_helical
THOC7
Motif
Other DBs
NCBI-GeneID:
121942837
NCBI-ProteinID:
XP_042342039
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All DBs
Position
5:complement(20390264..20410050)
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AA seq
1298 aa
AA seq
DB search
MPSKTAKSSTASAKPKGKGSQPRDDSEDELDVPPKETNSNGQEEAPPTTDPSHGEAAEAV
DNRSWRRSSVAPPPPPPPPMTNEPGAPRLMITHLVNRNFKSYAGEEILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGD
DYEVIPNSKFYVSRTANKDNSSAYHINGKKATFKEVGALLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPILTLARRIELLNEQRGEKLNRVKLVEK
EKNALEGEKNKAVEFLTLENDIFKHKSQLCQYYVHDLQKRVVDKDQEKQKIMEDTKELTE
KNAKISQEMEKMNQELKNVEKKQNKINKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKK
LQKQLEKDTEKLEEVRGVPASSEKAISEATARKEELEKQKVKEEKKLEEVMESLKEETSG
LQQDKETKEKELMELSKAVNETRSRMDLAQSELDLYLSRHNTALTQLNTAKQTLQTTSDT
LRERRAAIKDLEVKIPQKEQELKKDEGALEQLIKMDNETREVVREMRQKVDEAKSSLSSN
RSRGRVLDALMQQKKSGRIPGIFGRLGDLGAIDEKYDVAISSSCGALDNIVVDTIDTAQK
CVMFLKEQNIGFATFIGLDKMKVWERNMAPIHTPEDSPRLFDMVRVKDEKVRPAFYFALR
DTLVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRVLKGRMGSSIGTEVSQE
ELDLMESKLNEKVSKLQSCQDKKLQLEENIQRLQPQLRDMKNTLEKYANSMTSLADQETH
LKLQIKELEANVLAAAPDKAKQKQMEKSLDAFKKDYEAASSKAGKVENEVKRLHNLIVDI
NSHKLKAQQDKLDKVNKELDDCSSTITKAKVAIKTADRNLKKCEESVSRVQAELEENEKS
MAELTEQLKKLEDEAGEVMKACQEAEAALPEVQEQYQGVLKEIKVLQQQEHAMQEESLSV
RLRIEQIETTITEHNNKIKHWQKEATKLSLHTIEGQPAEELPVLTSAELEEISNPNVIIN
KMITLETKCSQMKPNLGAIAEYKKKEEMYLQRVAQLDEITTERDQFKRGYEDLRKQRLNE
FMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVGINPKTIVFREHDAVTA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagagctcaactgcctccgccaagccaaaagggaaagggtcg
cagcctcgggatgactccgaagacgagctggatgtaccccctaaagaaaccaactccaat
ggccaagaggaggcaccgccgacaactgatccgtctcacggggaagctgccgaggcggtt
gataatcgaagttggaggagatcctcggtagcaccccccccacccccgcccccaccaatg
accaatgaaccgggcgctcctcgcctcatgataacacatttagttaatcgcaactttaaa
tcttacgctggcgaggagattctggggccttttcacaagcgcttttcgtgcatcattggg
ccaaatgggagtggaaagtccaatgtgatagattcgatgctctttgtgtttggatacaga
gctcaaaagatcagatcgaaaaagctttcagtgctgattcacagctctgataaacacaag
gatgtgcaaagctgtactgtggaggtgcattttcaaaagattattgataaggaaggagat
gactacgaagtcatccccaacagcaagttctatgtttccaggactgccaacaaagacaat
tcctcagcctaccatataaatggcaagaaagccacattcaaagaggtcggtgctttactc
cgaagccatggtattgacctagaccacaacagatttctgattctacagggcgaggtggag
cagatcgccatgatgaagcctaaaggtcagacggagcatgacgagggtatgctggagtac
ctggaggacatcattggctcctgccgcctcaaggagcccatccttacgctggcccgccgc
attgagcttctcaatgagcagaggggagagaagctaaaccgagtgaagctagtggaaaag
gagaagaatgctttggagggagaaaagaacaaagccgtggagttcctcaccctggagaat
gacatcttcaaacacaagagccagctctgccagtattatgttcacgatttgcagaagcgt
gtggtggataaagatcaagagaagcagaagatcatggaggacaccaaggaactcactgag
aaaaatgcaaaaatatcacaggagatggagaaaatgaaccaagagctcaaaaatgtggag
aagaagcaaaataaaatcaacaagtacattgagacccagaaggagaagttcacccagctg
gacctgcaggacgttgaagtgcgtgagaagattaaacactccaagagcaagaacaagaaa
ctgcagaagcagctggaaaaggacacagaaaagctggaggaagttcgcggtgtaccagcc
agcagtgaaaaggccatctctgaggcaacagctcgcaaggaagagctggagaagcagaag
gtgaaagaggagaaaaaacttgaggaggtgatggagagtctgaaggaagagaccagcggc
ttgcaacaggacaaagagaccaaagagaaagagctgatggagctcagcaaggctgtaaat
gagacccgctctcgtatggacctggctcagtcagagcttgacctctaccttagccgtcac
aacacagctctgacacagctcaacacggccaagcagacacttcagacaacctccgacaca
ctgcgtgagcgccgtgctgccatcaaagatctggaagtcaagataccccagaaagaacag
gagctcaaaaaggacgagggagcactggagcagctgataaagatggataatgagacaagg
gaagtggtgagggaaatgagacagaaggtggatgaagccaagagctctctgtcctccaac
cgcagtcgcggaagagtcctggatgccctcatgcagcagaagaagagcggcagaatccct
ggcatctttggaagattgggagaccttggagccatagatgagaaatacgatgtggccatt
tcctctagttgtggcgctttggacaacatcgtcgtggataccatcgacacagcgcagaaa
tgtgtcatgttccttaaagagcagaacattggttttgccaccttcatcggccttgacaag
atgaaggtgtgggagaggaacatggctcctattcacaccccagaggacagccctcgtctc
tttgacatggtgcgcgtgaaggacgagaaggtgcggccagctttttactttgccctgaga
gacaccctggtggcccaggacatggagcaggccacgaggatggccttccagaaggacaag
cgctggagagtggtcaccctgaagggacagatcattgagatggcgggaaccatgactgga
ggaggaagagtactgaagggcaggatgggctcctctattgggactgaggtctcccaggag
gagcttgaccttatggagagcaagctgaatgagaaagtgtcgaagctgcagagctgccaa
gacaaaaagctgcagctagaggagaacattcagcgcctgcagccacagctcagagatatg
aagaacaccctggaaaaatacgccaacagcatgactagtctagctgatcaggagactcac
ttgaaacttcagatcaaggaacttgaggccaacgtgctggctgctgccccagacaaggcc
aaacagaaacagatggagaagagcctggacgctttcaagaaagactatgaagcagcatcc
agcaaggctgggaaggtggaaaatgaggtgaaaaggctccacaacctcattgtagacatc
aatagccacaagctgaaggctcagcaggacaagctcgacaaggtcaacaaggagctggac
gactgctcctccaccataaccaaggccaaagtggccataaagacagctgaccgcaacctg
aagaagtgtgaagagagtgtgagtcgtgtgcaggctgagctggaagagaatgagaagtcg
atggccgagctcacagaacaactgaagaaactggaggatgaggccggggaggtcatgaag
gcctgtcaagaggctgaggccgcacttcctgaggtgcaggagcagtatcagggggtgctg
aaggagataaaggttctgcagcagcaggagcacgctatgcaggaggagtccctcagtgta
cggctgcgcattgaacagatcgagaccaccatcaccgaacacaacaacaagatcaaacac
tggcagaaagaggccaccaagctgtcccttcataccattgagggtcagccagcagaggaa
ctccccgtactgacttctgcagaacttgaagaaatctccaatcccaacgtcattatcaac
aagatgatcacgttagagaccaaatgtagtcagatgaagcccaaccttggcgccattgct
gagtacaagaagaaggaggagatgtacctgcagcgcgtggctcagctggacgagatcact
acggagagagaccaattcaaacgtggctacgaggacctgcgcaaacagcgcctcaacgag
ttcatgaccggattcaacatgatcacgaacaagctgaaggaaaactaccagatgctcaca
ctgggtggcgacgcagagttggagctggtggacagtttagaccctttctctgagggaatc
atgttcagtgtgcgtcctccaaagaaaagctggaaaaagatctttaacctatcaggtgga
gagaagaccctcagctccttggctctggtgtttgctctgcaccactacaaacccacaccg
ctctacttcatggatgagatagacgctgctctggatttcaagaacgtctccattgtggcc
tgttacatttacgaacaaacaaagaacgctcagttcatcatcatctctctgaggaacaac
atgttcgagatcgccgatcgtctcatcggcatctacaaaactcacaacaccaccaaaagc
gtgggaatcaaccccaaaacaatcgtgtttagagagcatgacgctgtcacagcttaa
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