Plectropomus leopardus (leopard coralgrouper): 121942843
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Entry
121942843 CDS
T07454
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04137
Mitophagy - animal
plep04140
Autophagy - animal
plep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121942843 (hif1al)
04137 Mitophagy - animal
121942843 (hif1al)
04148 Efferocytosis
121942843 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121942843 (hif1al)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121942843 (hif1al)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
DUF3446
Motif
Other DBs
NCBI-GeneID:
121942843
NCBI-ProteinID:
XP_042342051
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All DBs
Position
5:31857808..31881524
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AA seq
672 aa
AA seq
DB search
MEEREETVAVKRGAEERKLRSRDAARCRRSQETGVFYELAHTLPLPRRVCTHLDKSAIMR
AALSFLRMHRLLRPAVEHRFLLLLDIGVNCEKQQEEDSVEEEDPMDAFCPQALAGFIIVM
TEEGDMIYLTENVSRHIGITQTVVAVCCFQLELLGQSIYDFVHPCDQEELRDLLTPGLSK
KPLAEQLNERDFFLRMKSTLTSRGHTVNIKSAVWKVLHCAGRMLQPGGGCTSPPGGRVMT
LLCEPIPHPSSVEFPLDARTFLTRHSMDLRFTHCEGRVTELVRYKPEDLIGRSAYEFHHA
LDSDHVKKSLHTLLSKGQVSTRHYRFLANRGGFVWAETQATVLYSSKTSQPEAVVCLNFI
LSGIEQPDVVFSMEQIRCGGVAEAEPLSPALPPEDCVTCDSERQTQDAVLIPSSSADLFF
RLKEELQEHLQLPPEAGDVIVSPTGAFVELSFVSPPSPDSVPDHPQDLSTPQLRQLLSHI
FSPNTPPSSSSSASSSDAEQSPSEEELMDTSEMENLFAVRPEDEQKYGQTLEEAMDLDLL
APYISMDDDFQLTVLSSLPEEAAKLPFSWSDSSTVSPAVTVRKKRCHNADDELPSQLMIQ
DKRQKQDPSSPEEEQLLSHRLPGCLEETDQSESFLDPVPRGRTQLLTDRDPVLGGIQGHC
NPAGVKHTHTHT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagagaggaaaccgtcgcggtcaaacgaggagcagaggagaggaagctgcgt
tctcgcgatgcagccagatgcaggcggagtcaggaaactggagtgttttatgaacttgct
cacactctgccgctcccccgccgagtctgcacgcacctggacaaatccgccatcatgaga
gccgcccttagcttcctgcggatgcaccgcctcctccgacctgcagtcgagcaccggttt
ctgctgttgctcgacatcggtgtaaactgtgagaagcagcaggaggaggactctgtagag
gaggaggatccaatggatgctttctgtcctcaggcgctggctggcttcatcatagtgatg
actgaggagggagacatgatttacctgactgaaaacgtcagcagacacatcggcatcaca
cagacagttgttgctgtttgttgttttcagctggagctgctgggtcagagtatttatgac
tttgttcatccctgtgatcaggaggagctccgagacctgctgaccccaggtttgagtaag
aaaccactggcagaacagctgaatgagagggacttcttcctgcgcatgaagagcactctg
accagcagggggcacaccgtcaacatcaagtctgctgtatggaaggtcctccattgtgca
ggtcgtatgcttcagccggggggcggctgcacgtcgccgcctggtggcagagtgatgacc
ctgctgtgtgaacccatcccccacccgtccagcgtggagttccctctggatgcacgcacc
ttcctcacccgtcacagcatggacctgcgcttcacacactgcgagggcagggtgacagag
ttggtgagatacaaacctgaggatctgattggtcgctcagcctacgagtttcatcatgcg
ctcgactctgatcacgtcaaaaagagcctgcacacactgctgtccaaaggtcaggtgagc
accagacactatcgtttcctggccaacagaggtggatttgtgtgggccgagactcaggcg
accgtcctctacagcagcaagacgtcgcagccggaggccgtcgtctgcctcaacttcata
ctcagtggcatagagcagccagacgttgttttctccatggagcagatccgttgtggcggg
gtggctgaagctgaacccctctcaccagcacttccaccagaagattgtgtgacttgtgac
agtgagcgtcagactcaggacgcagttttgattcccagcagctctgcagatctcttcttc
agactgaaagaggagctgcaggagcatctccagttgcctcccgaggccggagacgtaatc
gtctcaccgacaggagcatttgttgagctgtcgtttgtcagtccgcccagtccagactca
gtgccggaccaccctcaggacctgagcactccacagctgcggcagctcctctcacacatc
ttcagccccaacaccccaccttcatcatcatcatcagcctcctcatctgatgctgagcag
agtcccagtgaggaagagttaatggacaccagcgagatggagaatttgtttgccgtcagg
ccagaagatgaacagaagtatggacaaacactggaggaggcgatggatctggatttgttg
gctccgtatatctctatggacgatgacttccagctgaccgtcctcagcagtttgccagag
gaagccgccaaacttccgttctcttggtctgattcctcaactgtatcgcctgcagtcaca
gtgagaaagaaacggtgtcataacgcagacgatgagctgccgtcccagctgatgattcag
gacaagagacagaaacaggatccttcctcaccagaagaggaacaacttctcagccacaga
ctgccgggctgtctggaggaaactgaccaatcagagtcgttcttggacccggtgcctaga
gggcggactcagcttctcacagacagagaccctgttttaggaggcatacagggacactgt
aatcctgcaggtgtcaaacacacacacacacacacatag
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