Plectropomus leopardus (leopard coralgrouper): 121942851
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Entry
121942851 CDS
T07454
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04517
IgSF CAM signaling
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121942851
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121942851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plep04812
]
121942851
Cytoskeleton proteins [BR:
plep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121942851
Intermediate filaments
Intermediate filament-binding proteins
121942851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CH_2
Motif
Other DBs
NCBI-GeneID:
121942851
NCBI-ProteinID:
XP_042342074
LinkDB
All DBs
Position
5:complement(30870951..30935366)
Genome browser
AA seq
1442 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
KIINRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPFVPRDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMESEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRRDELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQEHIMEV
KSEWKKLEDQAAQRLGHLQEALNFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVSEAVDKHRLHVVSLRKHMVALPLQYREQEEVQMRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHL
ATAHPGRAMEVLVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAERLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIKERIDTLANRGNQNRE
LAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKASCMCACLYYLIPTARGQKYRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQVVNYGK
IR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagcttaacaacaac
aaccgaccaagcagctcgggattctgggagacggagtgcaccagctccaagctgtttgag
tgctcccgcatcaaggccctcgcagatgaacgagatgcagtacagaagaagacttttacc
aagtgggttaactcccatttggccagagtgtcttgtcgaatagctgacctctacaacgac
ctaagagatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcctacgcggggtcgtatgcggatccactgcctggagaatgttgacaaagctcttcag
ttccttaaagaacagagagttcacctggaaaacgttggctcccatgacattgtggatgga
aaccaccgtctcaccctgggccttatgtggaccatcatcctacgcttccagatccaggtg
atcaaaatagagacggaggacaacagagaaactcgctccgccaaggatgccctgctgctc
tggtgccagatgaagaccgcagggtaccctgaagtcaacatccagaacttcaccacctgc
tggagagacggccttgccttcaacgccctcatacacagacacagaccggacttgatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagccttcaacatcgct
gagcagcacctgggtctcaccaaactcctagaccctgaggatgtgaacacagagaaccca
gatgaaaagtccatcatcacctatgtggtctcctactaccactacttctccaaaatgaag
gctcttattgtggagggcaagagggttggcaaggtactagacaattgtatcgaggcagag
aagatcatcaaccgctatgaggctctggcgtcagacctgctggactggatagaaaagact
atcgcggtcatcagcaaccagaagtttgccaactcgctgactggagttcagcagcagcta
caggccttcacaacctactgcaccatagagaagcccatcaagtttcaggagaaagggaat
ctagaagtccttcttttcaccatccaaagcaagctcagagccaacaaccagaaacctttc
gtgcctcgtgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gcagaacatgaaaggggcgtggctttgcgcaaggagttgattcgtcaggagaagctggag
ctgctggctcagtgctttgaccacaaaaccaccatgagacaagcctggctcaatgagaac
cagagacttgtatcgcaggacaattttggctatgacctaccagcagtcgaggcagcaatg
aagaaacacgaggccatcgaggcagacatagcctcatatgaggagcgaattggcgtggta
gtggaacttgctgcagagatggagtctgaaggatactatgatatccggcgaatcttggca
cgaaaggagaacattctgggccagtggagtctgctgaaggagctggttgctgggagaagg
acccggttagagaagaacctggccctacagaagacttttcaggacatggtctacatgatt
gactggatggaggacacacaggttcagcttctgtcgaaggactttgggaagcatcttttg
gaggtggacgacctgctgcagaaacacagcctgcaagaagctgacattgcagtccaggct
gagagagtcgagacactcaacaccgctgcactcaaattcaccactatagagggttatcaa
ccgtgtgacccacaggtgatctgtaaccgtgtcaaccatgtctcttcctgtctggaggag
ctgaaacaacttgcagctaaaagacgagatgaacttgaggagtcaagacaactgtgggct
ttttttcaggagctggaggagtcagaggcctggatcagggagaagagctccatcctgggg
gctcagggttacgggaaggacctgagcagtgtgctgaagttactacaaaaacataagact
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaaacgaggaaaa
cagatcctgagcgagaagagctttggcacagcagggatccaggagcacattatggaggtg
aagagcgagtggaagaagctggaggaccaggcagcgcagcgtcttggtcacctccaggag
gcgcttaacttttttcagttctccactgagacagacgatctggtggcatggctgcaggac
gcttaccgcctggtctccagcgaagactttgggcatgatgagtactccacccagtctctt
ctgaagaaacacaaaggggtcagcgaggctgttgacaaacatcgtctacatgtagtgtca
ttgcggaagcacatggtggcgctgcctctgcagtaccgtgaacaggaggaggtgcagatg
cgtatgggggaggtggaacagctgtacaccgaggtggccgaggtggcggtgctcagacag
cagtggcttcacgacgcccttgcggtctaccgcatgttcagtgaggtcaatgcctgcgag
ctctggattgatgagaaggagcagtggttggacaagatggagatcccagagagactggag
gacgtggaggtggtggcacacaggtttgagagcctggaccaggagatgaacagcctaatg
ggaaggatcttggacgttaaccagatagttcagcagctcctggatggaggccatccatcc
tctgcagaggttagaggatgtcaggaccatcttaactccaggtggaacagcattgtggag
ttggttgagcagaagaaagatcagctggactcgatgttacgtctgcagaactacctgctg
gagtgtgctgagatcaagtcccagatccaggacaagagaaaagccattgacgccactcag
tatgtgggcagcgacctgggaggagtccttgctctgcagagacgtctctccaccatggag
ggagcactgtctgtcctggagccaaaactgctgcatctacaggaagaggcagagcatttg
gccactgcccacccaggtcgggccatggaggttctcgtgccgtttgatggcattagtgtg
gagtgggaggagctgaaacgcaccctgcagggttgtgaggactcgttgatggtggctagc
aggctgcagagcttcatacaggacctggactctttcctcacctggttggtgcaaacacag
acggctgcagcctcagatcagctgcccaatgaccttgaagaggctgagagactcataaac
aaacatgctgccctaaaagaggagatcggacggtatgaagaggactacgagcgcctgcag
gccatgaacgagctgctggagtctgaggaggctcctctcccgcaggccgctctgcagcag
tggcttcagaagcttgatgtcggctggaacaaactgctggagatgtgggagagcaggaga
gaagttctggtccaggctcacattttccatctattcctgcgagatgtcaaacaggccgag
tccttcctcaacaaccaggagtcagcgctcgctcacgtggagctgccaacgacagtggaa
acagttgaagccgccataaagaaacacaaggacttcactaccaccatggagctgaacctg
caccggatcaaagctgtgatcgaggctggagagagtctgatcagccagagtaacatctac
tccgagcgcatcaaggaacgcatcgacaccctcgccaacaggggaaaccagaacagagag
ctggcccagcagtggctggaaaaactgaatgaccagtgggaactccagaggtttcttcag
gactgtcatgagctgggggactgggtgtgtgagaagatgctgatggcgagggacagcagc
cgtgacgagacccagaagcttcataagaaatggctgaagcaccaggcattcatggccgag
ttggcccaaaataaggaatggctggacaaaattgaaaaggcatcgtgcatgtgtgcgtgc
ctctattacctcattcccaccgcaagagggcagaagtacaggtggaacagcattgtggag
ttggttgagcagaagaaagatcagctggactcgatgttacgtctgcagaactacctgctg
gagtgtgctgagatcaagtcccagatccaggacaagagaaaagccattgacgccactcag
tatgtgggcagcgacctgggaggagtccttgctctgcagagacgtctctccaccatggag
ggagcactgtctgtcctggagccaaaactgctgcatctacaggtagtaaattatgggaaa
atacgttga
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