Plectropomus leopardus (leopard coralgrouper): 121943026
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Entry
121943026 CDS
T07454
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04270
Vascular smooth muscle contraction
plep04625
C-type lectin receptor signaling pathway
plep04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121943026 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121943026 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
121943026 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121943026 (arhgef12a)
Membrane trafficking [BR:
plep04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121943026 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
HEPN_AbiU2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
121943026
NCBI-ProteinID:
XP_042342318
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All DBs
Position
5:complement(17482937..17528319)
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AA seq
1454 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDRKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLTQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSSTQPPWDENSSVCSQRVDMLQKMLSKEQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFETEHTPSKGDNSTDLSWSTTPIS
RGFGPGSPESLYLRESSCPSPKSTPRNSFNSCHSPEGEDATDLVTMRPFNTEMALKGSYK
DSLSPTTVSSPSSSRLVSQIIGAEDDYFDSDQEQTNGQCNSFNSIEQLKSRPAHLAAFLH
HVISQFDPAPVLCYLYADFYKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDR
RRTELIPEEINRQHVQTLQDSLLPDIQKNLEDFRQKRSMGLTVAEVELARLDQERVRDRV
TQERERSYAENIITKIEDILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRV
RINFLPKIKKSIKTEKEGEEKVKKARFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLS
QPTLGASDHMDAGRLRGSQSSEGSELTHSMSVNTSSPNSATYSSDTSRDADMGGTPTSGP
SRLSDGLQSDPLDGLSHIDLYNLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDD
QGTDSEHDPPNWQQLVGREVLAGLRPQEIKRQEVINELFYTERAHVRMLKVLDHVFYQKL
SKEAILPPADIKNIFTNLEEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSGGEE
EKIKQAVGTFCSNQPFALEIIKSKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMQRL
TKYPLLLDNIAKYTDDAVEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLS
SLKQTDNPMILELKNLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERL
ILKCHSKNLAGSADTKHIFSPIIKLNTVLVRSVATDHKSFFVLSMSDNGAQIYELMAPTV
SDQRTWQRLITQRADAMKVKPHSVIPLPQTDGERDGVEIITEGVSRLSRDADRTSTGSTQ
STDKESSPAPRSVTQSSLPGNNPFEGVKAEEEEEEEGFVDPELSYQVAEEGKEGDSFNMF
PSRADEALKTLAALKQVLVTQLMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARVMVHNG
SEKNSSQTEDPTQDLGSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLR
TSQGCAADSGINLRFSSASQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRP
ERPAADTDGNKDKR
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagctttactgacaggtttcccaagaaagcaaacagaactagc
agcattctcagtaaagaccaccccccggacaggaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagagatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagcggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatct
ggctcctatgtggccctcacagtgttggggcgccctccagggctcacccagatccccttg
tctgaagcagagtctgagatgttgggcgttagtatttcatctcctaactcgccagcagcg
gaacgcccctacagtcccctggaccgcctctcctccactcaaccaccatgggatgagaat
agcagcgtctgcagccagagggttgacatgttgcaaaagatgctctcaaaagagcagcag
gagctgcaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtagcatgtttgagacagag
cacactccctctaagggagacaacagtacagacctgtcctggagcaccactcctatatct
cgtggatttggacctggatctccagagagtctttacctaagagagtcatcctgccccagc
ccaaagagcacacccaggaacagcttcaactcctgccactctccagagggggaggacgcc
actgacctggtaaccatgagaccttttaacacagagatggcgctaaagggcagctacaag
gactctctgtcccctaccacagtcagcagtccctcttcctcccgcctcgtctcgcaaatc
attggagctgaggatgactattttgattcagaccaggagcagacaaatggccagtgcaac
agctttaacagcatcgagcagctcaagtctcgtcccgcccacctcgcagccttccttcac
catgtcatctctcagttcgaccctgctcctgtgctgtgctacctctacgctgacttctac
aagcagaccaactccaaagagaccagacgggtgttcatggaccttcacaccttcttcatt
gaccgtggagcaaatttaaaagttgctgttcctgaatccatctctactgatctcgaccgc
cggcggacagaactgatcccagaggaaataaacagacaacatgttcaaacgctacaggac
tctctgctccctgacatccagaagaacctcgaggatttcaggcagaagcgcagtatgggc
ctaacggtggctgaagtagagctggccagactggaccaagagagagttagagaccgtgtc
actcaggagcgagaacgctcatatgctgaaaacatcatcaccaagatagaggatattctg
ttaactactcagaccacagaggaagagaaatgcactacaatgcagtatgtcatctataca
tacatgaagcaccttggtgtgagggtcaaggaacctcgcagtctagagtcaaaacgggtc
aggatcaactttcttcccaagatcaagaaaagcatcaagacagaaaaggaaggagaagag
aaggtgaagaaagccagatttcccagtatacttggacctcagcgtcggcccagccgcatc
gaagctgcatcggtgggtaaagccttggatggtcgcccccggccacagaaacagttgtct
cagcctacactgggagcgagtgatcacatggatgccggtcgtctgagaggcagccaatcg
agcgagggctctgagctcacacactccatgtctgtcaacacctcatccccaaacagcgcc
acctacagctcagacaccagccgagacgctgatatgggtgggactccgacctcaggcccc
tccagactgagtgacggccttcagtccgaccctcttgatgggctgtcgcacattgatctt
tacaacctggaccaactgcaagaggatgacagagaaagcgacagagcccacgagggaaca
ccaaaggccataagaaggctggagggactgggtgcagctgatgtccagagtgaggacgac
cagggaacagactctgagcatgaccctccgaactggcagcagctggtggggcgagaggtc
ctcgcaggtctcaggcctcaggaaatcaagagacaagaagtcatcaatgagctgttctat
acagagcgtgcacatgtgaggatgctgaaagttttggaccacgttttctaccagaagctc
tccaaagaggccatcctgcctcctgctgacatcaagaacatcttcaccaacctggaggag
attctacagctgcacgtttcaatactggagcaaatggcagccgttcggaagagaaatgag
tcttcagtaattgatcagataggagacgacttgctctcttggttcagcggtggagaggag
gaaaagatcaagcaggcggtggggacgttctgcagcaaccagccttttgctttggagatc
atcaagagcaagcaaaagaaagactcgcgatttacttcgttcatccaggaggcagagagt
aacagactgtgtcgccggctgcagcttaaggacatcattcctgtagagatgcaacggctc
accaagtaccccctgctgctagacaacattgccaagtacacagacgacgcagtggagaag
gacaaagtgaagcaggcagcagactgctgtagaaagatcctcaatcacgtcaaccaggct
gtgaaggagtctgaggacaagcagaggttggaggactatcagagaagattggacctctcc
tctttaaagcagacagacaaccccatgatcctcgagctcaagaacttggatctaaccaag
agaacaatggtacatgagggaccactctcatggaaagtgaacaaggacaagactatcgag
ttgtacacactcctcctggaggacatcctggttttgctccagaaacaagacgagcgtctg
attcttaagtgtcacagtaaaaatctggcaggcagcgcagataccaaacatatcttcagc
cccatcatcaaactcaacactgtgctggtgcgctccgtggccacagaccacaagtctttc
ttcgtcctatccatgtctgacaacggagcccagatctatgagctgatggcacccacagtt
tcagatcagagaacatggcagcgtctaatcacccagagagctgatgccatgaaagtcaaa
cctcacagcgtcataccattacctcagaccgatggggagagagacggtgtggagatcatt
acagaaggtgtttccaggctgagtcgagacgcagaccgcacatccaccggcagcacccag
tccacagataaagagagcagtccagctcccagaagtgtgacgcagagttctctacctggt
aataatccctttgagggagtgaaggcagaggaagaggaggaggaggaaggttttgtggac
ccagagctttcctaccaagtggctgaagagggcaaagaaggagactcgtttaacatgttt
ccctccagagcagacgaagcactgaaaacattggcagcattaaagcaggtgttggtgacc
cagctgatgtcccaggaggctgtagagcaaaccaaacgctccacaggggcacgtctcctt
aggaccacctctctgcggacccctgtagacagccgcgcacgggtgatggttcacaatggc
tcagagaagaacagctcccagacagaggacccgactcaggacctgggctccggggacacg
ggcttcttcgattctcctgaagattatgcagggtatttagtcctggagggttacggtggc
ccaggggagagcagcacagatgatgacatattggcatcaaccacagggaagcagctgaga
acctcacaaggctgtgctgccgactctggcatcaacttgaggttttcttcagcgtcacag
gctggcagcctctcctcttttagcagacaggtcttgtctcaccttagaaaccttcaggcc
aacctcaactatctgaaggaggttgaggccaagtacaataatctaatacgccaaaggcca
gagaggccagcagcagacacggatggaaacaaagataagagatag
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integrated database retrieval system
