KEGG   Plectropomus leopardus (leopard coralgrouper): 121943042
Entry
121943042         CDS       T07454                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:plep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:plep04131]
    121943042
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plep04147]
    121943042
Membrane trafficking [BR:plep04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    121943042
Exosome [BR:plep04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121943042
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 NBCH_WD40 PEP5_VPS11_N Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 121943042
NCBI-ProteinID: XP_042342345
LinkDB
Position
5:5618509..5633399
AA seq 1226 aa
MPLRLDIKRKLTARSDRVKSTDLHPTEPWMVASLYSGTVVVWNHETQMMVKTFELCDLPV
RVAKFVARKHWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIVVHPTQPYILTSSDD
MLIKLWDWDRKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSKTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHNQNVTCVSFHPE
LPIILTGSEDGTVRVWHSNTYRLENTLNYGMERVWCICGQPGSNSVALGYDEGSIIIKMG
REEPAMSMDSSGKVMWARHSEVQQANLKAMGDTEIRDGERLPLGVKDMGSCEIFPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYATREGSSMVKIFKNFKE
KKAFKPDFGAEGIFGGFLLGVRSNSGLAFYDWESAELIRRIEIQPKHIFWSDSGELVCLS
TDESFFVLRFLQERVAAAQESKEEITDDGIEGAFEVLGEVSEVVKTGVWVGDCFIYTSSL
NRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNVIGYSLLLSVLEYQTAVMR
RDFSTADKVLPTIPKEQRTRVALFLEKQGFRQQALAVSTDPEHKFELALQLGELKIAYQL
AVEAESEQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATASGNADMVGKLAEGAE
RDGKTNVAFLTYFLQGRLDKCLDLLIETDRLPEAAFLARTYLPSHVSRVVKLWKESLSKV
NQKAADALADPSQYSNLFPGLQQALLAEEYLKETHVRVRPAAEYPLIMPNEDRNVLDESA
GFVSKGEITEPEEVVKSVNEVVMVAAVTEAVSAEAAVVEEPVPLQQDIIDPVSATREESI
PTAASPLPVTVTEAHVEPEKAESVSSEEDAVPASDEPLVSVEEDIVESTSEIAPEEPAMV
QPSPVEDVASSVETNVLEISPATDAELASCVSETYLIKTTSETIMATEETPSETPATDAF
ISTGLLVDTDVTESVATGEMPVNEELETAIISSEAATIVETEAEETRVTEELVSETAVPA
AVEELISFENTASPVLDEPVQAQTCTDFALDPLLGPLEDTMPALKPVPAQEPEQEEQTTA
LPVKPEDNLEPAVPLQAEPEVVSPAAAPAEGNTAEEEEGPAGDKKPAEDLEAEINEEALD
DLDLDNFDLEDIDTTDVNLDDDFLSE
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgcctctgcggttagacatcaagcggaagctgactgctcggtcagacagggtgaagagc
accgacctgcaccccactgagccctggatggtggcgagcctctacagcggcactgtggtg
gtctggaaccacgagacacagatgatggtgaaaacctttgagctgtgtgacctgcctgtc
agagtggccaagtttgtagccaggaaacactgggttattactggagctgatgatatgcag
atccgtgtgttcaattacaacacgctggagcgagttcacatgtttgaggctcactctgac
tacatccgctgtatcgtcgtccacccgacacagccctacatcctcaccagcagtgacgac
atgttgatcaagctgtgggactgggacagaaagtggtcgtgcagtcaggtgtttgaggga
cacactcactacgtcatgcagattgtcatcaaccccaaagacaacaaccagtttgccagt
gcctctttggacagaaccattaaggtgtggcagctcggctccaagactcccaacttcact
ctggagggccacgagaagggtgtgaactgtattgactactacagcggaggagacaagccc
tacctcatatcaggggctgatgaccgcctggtcaagatctgggattatcagaataaaacc
tgtgttcagactctggagggtcacaaccagaatgtgacctgcgtcagtttccatccagag
ctgccaatcatcctcaccggctctgaggacggcactgttcgagtgtggcactccaacacc
tacagactcgagaacacgctcaactacggcatggagagggtgtggtgtatatgtggacag
cctggctccaacagtgtggcgttgggctacgatgaaggcagcatcatcatcaagatgggt
cgtgaggagccggccatgtccatggactccagcgggaaggtcatgtgggcccgccactcc
gaggtgcagcaggccaacctgaaggccatgggagacactgagatcagagacggagagagg
ctgccgctgggcgtcaaagacatgggcagctgtgagatcttcccccagaccatccaacac
agccccaacgggagatttgtagtggtgtgtggagatggggagtatatcatctacaccgcc
atggccctgaggaacaagagcttcggctcagctcaggagtttgtctgggcccatgactcc
tctcagtatgccacaagggaaggcagcagtatggtcaaaatattcaagaacttcaaagag
aagaaggcttttaaacctgactttggggctgaaggtatctttggtggcttcttacttgga
gtgaggtcaaacagcggcctggccttctatgactgggagagtgctgagctgatccgccgg
atcgagatccaacctaaacatatcttctggtcagactctggggagctcgtgtgtctcagc
acagatgagtctttctttgtgctacgcttcctacaagagagagtggcagcggctcaggag
tccaaggaggagataacagatgatgggatagagggcgccttcgaggtgctgggggaggtc
tcagaggtggtgaagacaggggtttgggtgggagactgcttcatctacaccagctctctg
aacagactaaactactatgttggaggagagatcattaccattgctcacctggacaggacc
atgtatctgctgggctacatccccaaagacgatcgtctgtaccttggagacaaggagctg
aacgtcatcggctactccctactgctgtcagtgttggagtatcagacagcagtcatgagg
agggatttcagcacagccgacaaggtgctacccacaatccccaaggagcagagaaccagg
gtagccctgtttttggagaaacagggcttcagacagcaggccctggctgtgtccaccgac
ccggagcacaagtttgaactggccctgcagctgggagagctcaagatagcctaccaactg
gccgtggaggcagagtcggagcagaaatggaagcagttggcggagctcgcaacgacaaag
tgccagtttagcttggctcaggagtgtttgcaccaggctcaggattacgggggattattg
ctgttggccaccgcctcgggcaacgccgacatggtgggaaaactggccgagggagcagag
agggatggcaagaccaacgtcgcctttcttacttacttcctgcagggaagattggacaaa
tgtctggaccttctcatcgaaacagatcggctgccagaggctgcatttctggcgagaaca
tatctgcccagccatgtgtcgagggtggtgaaactgtggaaggagagtctttccaaggtg
aaccagaaggcagcagatgctctggctgacccctcccagtacagcaacctgttccctggc
ctccagcaagccctgctggctgaggagtacctgaaggagactcacgtcagggtcaggcct
gctgcagaatacccactcatcatgccaaacgaggaccgaaatgttctggacgaatctgca
ggttttgtgtccaaaggagagatcactgagccagaggaagtggtgaagagcgttaatgaa
gtggtcatggtagcagcagtgactgaggctgtatctgcagaagcggcagtggtggaggaa
ccagttccactacagcaggacataattgatcctgtttccgcaacacgagaagaatccatc
ccaacagcagcatctcctctgcctgtcacagtaacagaagcgcatgttgaaccagagaaa
gcggaatctgtgtcttctgaggaggacgccgtccctgcgtcagacgagcctttagtctct
gtcgaggaagacattgtagagtccacctcagagattgcccccgaggagcctgcgatggta
caacccagtcctgtggaagatgttgcatcatcagttgagacaaatgttctggaaatttct
ccagctactgatgccgagcttgcttcctgtgtatctgaaacatatctaatcaagacaaca
tcagaaaccatcatggcaacagaagaaacaccaagtgagacaccggcaacagatgccttc
attagcactggtctgttagttgatactgatgtaacagagtccgtagcaactggagaaatg
cctgttaatgaagaactggaaacggctatcatctcctcagaagcagcaaccattgtagaa
acagaagcagaggagactcgtgttacagaggaacttgtttcagaaacagcggtgccagct
gcagtggaggagctgatctcctttgaaaacacagccagtccagtgctggatgagcctgtc
caagcccaaacttgtacagattttgcccttgatccactgctgggcccactggaagataca
atgccagcactgaagccagttccagcacaagaaccagaacaagaggaacaaaccacggca
ctcccagtaaagcccgaggacaacctggagcctgctgtgcctctgcaggctgagccagag
gttgtatccccagcagcagctcccgcagaggggaacacagcggaggaggaggaaggtcct
gcgggagataagaaacctgcagaggatcttgaagcagagataaatgaggaggccctggat
gatctggatctggacaattttgacctggaagatatcgacaccacagatgtcaacctggat
gacgattttttgagtgaatag

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