Plectropomus leopardus (leopard coralgrouper): 121943198
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Entry
121943198 CDS
T07454
Symbol
vps53
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121943198 (vps53)
Membrane trafficking [BR:
plep04131
]
Protein recycling
Others
EARP complex
121943198 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
121943198 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
hAT-like_RNase-H
Syndetin_C
Laminin_II
COG5_N
VPS51_Exo84_N
PsaD
Sec8_N
NBD94
Motif
Other DBs
NCBI-GeneID:
121943198
NCBI-ProteinID:
XP_042342593
LinkDB
All DBs
Position
5:15748514..15779609
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AA seq
829 aa
AA seq
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MEEEEFEFAEDLEAILHLXPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQGV
VNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FTGCTLTDTPGQKRPESPLDPTNPFLEDEAGEDMGTEKDDDLAKPRKPKAPDNPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTISSLLKEKEGSEAA
KFTMDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGADGGPSLFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaatttgaatttgctgaggatttggaggctattttgcatctanaccca
gaggtgcaactagctattgaacaggttttccccagccaagacccgctggacagagcagac
tttaatgctgtggagtacatcaacacactgttccccaccgagcagtctttggcaaatatc
gatgatgtggtaaacaagattcgtctgaagatccggcgcctggatgacaacatcaggacg
gtagtcagaggccagaccaatgtgggccaggatggcagacaggctttggaagaggcccag
atagccatccagcagctctttggcaaaatcaaagacatcaaggacaaggcagagaagtct
gaacaaatggtcaaggagattaccagggacattaagcagctggatcatgccaagcgccat
ctaactacatcaatcactaccctcaaccacctgcatatgttggcagggggtgtcgactct
ttagaagccatgaccagaaaaaggcagtatggtgaggttgccaacctattgcagggagtg
gtcaatgtgcttgagcatttccacaagtacatgggtattccccagataagacaactttca
gaaagggtaaaggcagcacagagtgagttggggactcaaatcctggcagattttgaagaa
gccttcccctctcaaggctccaagagaccaggtggtcccagtaacgtgctgagagatgcc
tgcctagtggccaatgtgctggatccacgcatcaaacaggagatcatcaaaaagttcatc
aggcagcacctctcagagtacttggtcttattccaggaaaaccaagatgttgcatggcta
gacaagatagaccgccgctacgcctggatcaaacggcagctggtggactatgaggagaag
tacggacgcatgtttcctgaggagtggtgcatgacagagcgtattgctgtggagttctgc
cacatcaccagggtggagcttgccaaagtaatgcgaacacgggctaaggagattgaggtc
aagctgcttctgtttgctattcagaggacaacaaacttcgagggtcttctggccaaacgc
tttacaggatgcaccttgactgacacacccggacagaaaaggccagagagccctctagat
cccactaaccctttcctggaggatgaggcaggtgaggatatgggcacagagaaggacgat
gatctggcaaagcccaggaagccaaaagctccggacaaccctttccatggcattgtctcc
aagtgctttgaacctcatctatatgtctacatagaatcccaagacaagaacctgggcgaa
ctgattgaccggtttgtggctgacttccgagcacaaggcccacccaaggcgggcactgag
gagggtggagcggtgttgcccagctgtgctgacctctttgtctattacaagaagtgcatg
gtgcagtgctcccaactgagtactggcgaaccaatgattgccctcacgaccatcttccag
aaattcctgagagagtatgcttggaagatcctctctggcaacctgcctaaatccagcagt
aacagtgggggccttaccatcagcagtttgttaaaggagaaagaaggctcagaagctgct
aagttcaccatggatgagctctgcctgatctgtagcatccttagcacggcagagtactgc
ctggctaccacacaacagttggaagagaaacttaaggaaaaggtggataaagtcctggtg
gagagaattaatttgactggtgagatggatacgttcagcactgtgatttcaaacagtatc
cagctacttgtccaagatcttgatgctgcctgtgaccctgccctcactgctatgagcaag
atgccgtggcagagcgttgagcatgtgggtgaccagagtccttatgtgacatcaatcatc
atgcacattaagcaaaatgtgcctatcattagagacaatctggcttccacgcgcaaatac
ttcacacaattctgcatcaagttcacaaattctttcattcccaaatttatcaaccacctg
ttcagatgtaagcctatcagcatggtgggagctgaacaactcctccttgacactcactcc
ctgaagacagtcttgctggatctgccctccataggctcccaggtgctccgcaaggcacct
gcaagctacaccaagattgtggtgaaaggcatgacccgtgcagagatgattctaaaggtg
gtgatggccccacatgaaccaccagtggtgtttgttgacaactacatcaagctcttggct
gatggaaatcctgaaaccttccagaagattctggacatgaagggcctgaagcgcagtgaa
cagagcagcatgctggagctcttcagacagaggctacccactccaccctcgggagcagat
ggcggcccttctctcttcagcaccccaacccctgagcaggagtcctcccgcatccgcaaa
ctagaaaaactcatcaagaaaagactttaa
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