Plectropomus leopardus (leopard coralgrouper): 121943335
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Entry
121943335 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121943335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plep02000
]
121943335
Transporters [BR:
plep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121943335
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121943335
NCBI-ProteinID:
XP_042342789
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Position
5:8320063..8327723
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AA seq
579 aa
AA seq
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MLNKKCATKHKQAEVEERGHWASKMEFLLAVAGNIVGLGNVWRFPYLCYKNGGGAFLVPY
LVFVVTCGVPLFLLETTIGQFTQEGSITCWRKLCPLAEGIGFGGQMIVFYICVTYSVILA
WALLYLVFSFSSQLPWASCNNYWNTDDCVDFSTQNKTSEWTNQTNTTSAATEFWERRVLA
ISGGIEEIGSIRWELMLSVIAVWIICYFCIWKGVRSTGKVVYFTATFPYVVLVILLVRGL
SLPGALQGVLFYLLPEPSRLTDPQVWMEAGAQIFFSYSIGAGSLIVLGSYNNYNNNCYKD
CMLLCLLNSGTSVVAGFAVFSVLGFMAHEQGVPIADVTESGPGLAFIAYPQAVAMMPFPQ
MWSVCFFVMIILLGLDTQFVAMEVLMTSITDMFPTVMRRAGRRERFLLLFCLLCFFSQLV
MITEGGMFVFQLFDYYACNGACVLLLSVFEALALGWIFGAERLYGIIKDMTGVKANPFFK
ICWLFLTPLVSLGSFICSLIVYEPLTFNRWYVYPTWAYVLGWVLALSSILLVPGWALYKL
GTGTGNLSQRLHHLCQSDPDYSLTQKRETELQPIREEVL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaaaatgtgcaacaaaacacaagcaagcggaggtggaggagagaggacac
tgggccagtaagatggagtttctcctggctgtggcgggaaatattgttggtctgggcaac
gtgtggaggtttccttacctttgctacaaaaatggaggaggtgcattcctggtgccatat
ctggtatttgtggtgacctgtggcgtacccctgttcctgctggagacgactataggccag
ttcacccaggagggcagcataacctgctggaggaagctttgcccacttgctgaaggtatc
ggctttggtgggcagatgatcgttttctacatctgtgtgacttattcagtcatcctggcc
tgggctttgctctacctggtgttctccttcagctcacagctcccctgggccagctgcaac
aactactggaacacagatgactgcgtagacttctcaacacaaaataaaacctctgaatgg
accaaccagactaacacaacctctgctgccacagagttctgggaacgacgagtactggct
atctctgggggcattgaggagatcggcagcatcaggtgggagctgatgttgtctgtgatt
gcagtgtggatcatctgctacttttgtatctggaaaggggtccggtctacaggaaaggtg
gtgtatttcactgccaccttcccctatgtggtgttggtcattcttttggtccgtggactc
tctcttcccggggctttacaaggagtactgttttatcttctgcctgaaccctcacgactc
acagaccctcaggtttggatggaggctggggcccagatctttttctcatacagcataggt
gcgggcagcttaattgtgcttggcagctacaacaactacaacaacaactgctacaaagac
tgtatgctgctgtgtttactgaacagtggtaccagtgtggtggctgggtttgcagtcttc
tctgtgctgggatttatggctcatgagcaaggtgttcccattgcagacgtgacagagtca
ggtccaggcttggcgttcattgcataccctcaggctgtagccatgatgccttttccccaa
atgtggtccgtctgtttctttgtcatgatcattctcttgggtctggacacacaatttgtt
gccatggaggtgttgatgacatccatcacggatatgtttcccacggtaatgcgcagggca
ggccgacgagagcgtttcctcctcctcttctgcctcttgtgtttcttctctcagctagtc
atgatcaccgagggagggatgtttgtgttccagttgtttgactactacgcttgtaacgga
gcctgcgtcctcttactcagtgtgtttgaagctctggctctgggatggatatttggggca
gagcggctgtatggcatcattaaggacatgacaggtgtgaaagccaacccattctttaaa
atctgctggcttttcctcacaccactggtctcactgggctcttttatatgttctttaatt
gtgtacgagcctttgacctttaatcgctggtacgtgtacccaacctgggcatacgtgttg
ggctgggtactggccctctcctccatcctgcttgtgccgggatgggcgctgtataaactg
ggaactgggactgggaacctcagtcagcgtttacatcatctgtgccaatcagatcctgac
tactcactgacgcaaaagagagaaactgagctgcagcccatcagagaggaagttctgtaa
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