Plectropomus leopardus (leopard coralgrouper): 121943438
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Entry
121943438 CDS
T07454
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121943438 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121943438 (dhx36)
03012 Translation factors [BR:
plep03012
]
121943438 (dhx36)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121943438 (dhx36)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121943438 (dhx36)
Translation factors [BR:
plep03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121943438 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
121943438
NCBI-ProteinID:
XP_042342895
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All DBs
Position
5:complement(21161933..21174526)
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AA seq
553 aa
AA seq
DB search
MMLAGSVRAYCVAECGGLELRDGAILVFLPGWDNISSLNDLLMAQQMFRSDRFVIIPLHS
LMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETNFDTNNNISTM
MAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKIL
KLGSIARFLEKALDPPTEKAVNLAIKNLIDLNALDRSENLTALGFHLARLPVEPHIGKLI
LFGALLGCLDPILTIAASLSFKDPFFIPLGKEKMADMRRRTLSRNSKSDHLTIVNAFQGW
EEAKQRGARYEREYCWDNFLSANTLQMLHNMKGQFAEHLMHAGFVSSRDPKDPKSNVNSD
NEKLIKAVIVAGLYPKVATIRPSHSKKRPGVKVYTQADGKVCIHPKSVNAEETEFNYTWL
IYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQETIAVDQWIVFRSPARIAHLV
KSLKKELDSLLEEKICNPAPIDWQNRQSKDCAVITAITDLITTQEKPTGSTQGGTWTPAP
RGQHNYFNDDDDD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggcaggcagtgtcagggcctattgtgtggctgaatgtggaggtttggagctc
agggatggagcaatcttggtcttcctgcctggctgggacaacatcagcagtctcaatgac
ctgctcatggctcagcagatgttccgatcagaccggttcgttatcatccctttgcactcc
ctcatgccgactgttaatcagacacaggtgttcaaaaggcctcctccaggagttagaaag
attgtgattgctaccaatatagctgaaaccagcatcaccatagatgatgttgttttcgtg
atagatggaggcaagattaaagaaaccaactttgacaccaataacaacatcagcactatg
atggcagagtgggttagcctggccaatgccaaacagaggaaaggacgtgctggcagagtg
tgtccggggaagtgctatcatctgtacaatggtctcagggccagcctgctggatgcctat
caattacccgaaattatgagaacaccactggaggagctctgcctgcagatcaagatattg
aagcttgggtctattgctcggttccttgagaaagcccttgaccctcccactgagaaggcc
gtcaacctggcgatcaagaacctcatagacctgaacgccctggaccgctcagagaatctg
acagcattaggtttccacctggctcgtctgcctgtggagcctcacattggaaaactcatc
ctgtttggagctctgctgggctgcctcgaccccatactcaccatcgctgcttcactcagc
ttcaaagaccctttcttcatacccctgggtaaagagaagatggcagacatgagaagaagg
accttgtccagaaactccaagagtgatcacctcactattgtcaatgccttccagggctgg
gaggaagccaaacaacgtggtgccaggtatgagagggagtactgctgggacaacttcctg
tctgccaatacactccagatgctgcataacatgaagggtcagtttgctgagcatctcatg
catgcaggctttgtcagcagcagggaccccaaagatcccaaatctaatgtcaactcagac
aatgagaagttaatcaaggcggtgattgtagccggtctgtacccgaaggtggccacgatt
agaccatctcacagcaaaaagaggcctggggtgaaggtgtacacccaagctgatggaaag
gtgtgtatccacccaaaatcagtcaacgctgaggagactgagttcaactatacgtggctc
atctaccacctcaagatgagaacgagcagcatcttcctgtacgattgcaccgaggtatcc
ccgttctcactgctgttcttcggaggagacatcacaatacagaaagatgaggaccaggag
actatcgccgtggaccagtggatcgtcttcagatcaccagcacgcatcgctcaccttgtc
aagagtttgaagaaagagctggactctctgctggaggagaagatttgcaaccctgctcct
atagactggcaaaaccgtcagtccaaagactgtgctgtcatcacagccatcacggacctc
atcaccacccaggagaagcccacaggcagcactcagggcggaacatggacacctgcccca
agaggacaacacaattacttcaatgacgacgacgatgattag
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