Plectropomus leopardus (leopard coralgrouper): 121943759
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Entry
121943759 CDS
T07454
Symbol
brip1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03440
Homologous recombination
plep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121943759 (brip1)
03460 Fanconi anemia pathway
121943759 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121943759 (brip1)
Enzymes [BR:
plep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121943759 (brip1)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121943759 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
121943759 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
121943759
NCBI-ProteinID:
XP_042343300
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All DBs
Position
5:complement(34262411..34327924)
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AA seq
1231 aa
AA seq
DB search
MAKSSVDYTIGGVKIHFPCKAYPSQLAMMNSIVRGLNYGQHCLLESPTGSGKSLALLCSA
LGWQQAQYAKLQGGGGVVEDKSEIDKNSGDFKKSNDTTPCQCVCHSKASKTTASTAAKPD
VVDLTSSPPAPQHAPLAEESKPKKLSIASRLSEKFQSSLSSDREKDNDFQPDRKRIRTAE
HKSRKRQRLEQGVIFIDDEPELENEPPCPQSLNTNSAHSQVAGLSSCCSSEPCSRCPCAS
TKDDVKDKGKDGRKKIPKIFFGTRTHKQITQIAHELKRTVYSCVPMTILSSRVHTCVHPE
VAPHSNRNERCKDLLDAKDGKSCHYYHGVQRMRDQSTVQQIHGLHAGWDIEDLVALGKRL
RSCPYFAARELMQEASIVFCPYNYLLDPMIRESMEINLAGQIVVLDEAHNIEDCARESAS
FTLDHSSLLMSRDELDGMVNSNIRRSKHEPLRDFCYSLINWIEESQSLMSERGYESACKV
WNGKEIVGIFHNLGITASTFNFLKQNLAAVLEKEESVGFVNGKEDTVQVPIISSATSTFL
KNLFMVLGFIYSSEDIFRFAEDYRVALQRTYAWTNQAPPDVPDAQGFFVRRHKQRQSIRV
KTQVLTLSFWCLNPAVAFSDMSRSVHSIVLTSGTLSPMASFSSELGVKFSIQLEANHVIN
KSQVWVGTVGAGPQGRKLCATFQHTETYAFQDEVGLLLLHVCQVVAKGVLCFLPSYKMLD
KLRDRWINTGLWEKLEQQKTVITEPRGGGKGDFDELLQMYYDAIKYCEERDGALLIAVCR
GKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGNRWYEIQAY
RALNQALGRCIRHKNDWGALILVDDRYRNNPNKYITGLSKWVRQLVQHHDTFSNAMQSLV
AFSQVQQKVEVAPADSQALSSSVSPPNSHSLGLLEASEPQTAHTCVKPAESQQDTSPSTV
QFLSQTKLKAGQNANTEWLNTTDSPSAQPIWNQNRTAQPLHHIFPSSPINTCFRTPVFKE
KGPSNSVQSVETCSHLEPEENQHISPPQQQTEAACLKQIPGDTSSEITEKTHNSALKPSP
VKTPPSCDSDLLSADNTDEDEEEEDQTVFFTPELFEDEGSEGSPQKDTKTQSXSKMVLEA
GNPALLSEGHTGCEQAQGQGQASVPDGQDAISVSKESAELSHRLQEELGAQRQGEEEEEG
EQEENQSRQTGSRLRRLSRSRYKALSTPAGN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcctctgtggattacaccattggaggggtgaagatccacttcccctgcaag
gcttacccatctcagctggcgatgatgaattcaatcgtacgtgggctgaactatgggcag
cactgtttgcttgagagtcccactggaagtggaaagagcttggccttgctttgctctgct
ctgggctggcagcaggctcagtatgctaaactacaaggaggagggggcgttgtggaggac
aagagcgaaattgataaaaacagtggagactttaaaaagtcaaatgacactaccccctgc
cagtgtgtgtgccacagcaaagccagcaagaccacagcttcaaccgcagccaaacctgat
gttgtggacctaacttcgtcacctccagcacctcaacatgcacctttagcggaggagtca
aagcccaagaaactgtctatagcctctcgcctgtctgagaagtttcagtcttccctgagc
tctgaccgtgagaaggacaacgacttccagccagataggaaacgcattcgcactgccgaa
cacaagagccgtaaaaggcagcgtctggagcagggagtgatattcatagatgatgagccg
gagctggaaaacgaacctccatgtcctcagagtttaaacaccaactcagctcacagccaa
gtggctggtttgtcgtcatgctgctcctctgagccctgctctcggtgcccgtgtgcttca
accaaagatgatgtgaaagacaaaggcaaagatggcagaaagaagattcctaagatcttc
tttggcactcgcacacataaacagataactcagatcgctcacgagctgaagcgcaccgtc
tactcctgcgtgcctatgaccattttatccagtagagttcacacctgtgtccacccagag
gtggcgcctcactccaaccgcaatgaacgctgcaaggatctgctggatgccaaagatgga
aagtcatgccactactaccacggagtccagaggatgcgtgaccagagcacagtgcagcag
atccatggactccacgcaggctgggacattgaggaccttgtggcactgggcaaacggctc
aggtcatgcccctactttgctgcccgtgaactcatgcaggaggcctccatcgtcttctgc
ccatataactacctgctggacccaatgatcagagagagtatggagatcaacctggcaggc
cagattgtggtgctggacgaggcccacaacattgaagactgtgctcgggagagtgccagc
ttcactttagaccacagcagtctgctgatgtccagagacgagctggatggcatggtcaat
agcaacatcagacgctccaaacacgagccgctcagggacttctgctacagcctgatcaac
tggattgaggagagccaaagcttgatgtctgagcggggatatgagagtgcctgtaaagtc
tggaatgggaaggaaatagtgggcatctttcacaacctgggcatcactgcgagcaccttt
aactttctgaagcaaaacctagcagcagtgttggagaaagaggagtctgttggttttgtc
aatggtaaagaggatacagttcaagttccaatcatcagctcagctacctccactttcctc
aaaaacctcttcatggtgctgggcttcatctattcctctgaggacatcttcaggtttgct
gaggattaccgtgttgctctgcagaggacctatgcttggacaaaccaggcaccacctgat
gtccctgatgcccagggcttctttgttcggcgacacaaacaacgccaaagcatcagagtc
aagacacaagtactgacactcagcttctggtgcctcaaccctgctgtggctttctctgac
atgagtcgctcggtccacagcattgtgctgacatcaggaaccctgtcacccatggcctcc
ttctcctctgaacttggggtgaaattctccatccagctggaggccaaccatgttatcaac
aagtcccaggtttgggtgggcacagtcggagcaggaccccaaggcagaaaactgtgtgct
accttccagcatactgagacatatgccttccaggatgaggtgggtttgctactgctccat
gtctgccaggtcgtggccaagggggtgctctgctttctgccttcttacaagatgctggac
aagctgcgtgaccgctggatcaacactggtctctgggagaagctggaacaacagaaaact
gtgatcacagagccccgcggcggtggcaagggggattttgacgaactgcttcagatgtat
tacgatgccattaaatactgtgaggaaagagatggggcattgctgatcgctgtgtgtcgg
ggtaaagtgagtgaaggactagacttcactgatgacaatgccagggctgtggtcactatt
ggaattcccttcccaaacatcaaagacctccaggtggaactgaagatgaagtacaatgac
cagcactgcaagtccagaggtcttctcccaggcaatcgctggtatgagattcaggcgtac
agagctctgaaccaggctctgggaaggtgtatccgccacaagaatgactggggcgcccta
attctagtggatgaccgttacaggaataatcccaataagtacatcacaggtctgtccaaa
tgggtccgccagcttgtccagcatcatgacactttcagcaatgccatgcagtctctggta
gccttctctcaggtgcagcagaaggttgaggtggctcctgcagacagtcaggccctcagc
tccagtgtctcacctccaaacagtcactcattaggtctgcttgaggcctcagaacctcag
acagcccacacatgtgtcaaaccggctgaatcccagcaggacaccagcccctcaaccgtc
cagtttctttcacaaacaaagttgaaagctggacaaaatgcaaacacagagtggttgaat
acgacggacagtccctcagcacagccaatatggaatcaaaacagaacagctcagccactg
caccacattttcccctccagccccatcaacacatgcttcaggacaccagtctttaaagaa
aagggacccagtaattctgtccagtctgtggaaacatgcagtcatttggagcctgaggag
aaccagcacatctcccctccacaacagcagactgaggcagcttgtctcaaacaaattcct
ggagacacttccagtgagatcacagagaaaacacacaattcggctctgaaaccgtctcca
gtgaaaacccctcccagctgtgacagtgacctgctctcagcagacaatacagatgaagat
gaagaggaggaggaccaaactgtcttcttcactccagaactttttgaggatgaaggcagc
gaaggcagcccacagaaagacacaaagacccagtcancctccaagatggttttagaggca
gggaaccctgccctgctgtcagaaggacatactggctgtgagcaggcccaagggcaaggc
caagcttctgttcctgatggacaggatgctatttcagtcagcaaggagagtgcagagctg
tcacacagactgcaggaggaactcggagcacagaggcagggggaggaggaagaggaggga
gagcaggaagagaaccagagcagacagacgggcagcaggcttcgcaggctgtctaggtcc
aggtacaaagctctgtccactccagcaggtaactaa
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