Plectropomus leopardus (leopard coralgrouper): 121943788
Help
Entry
121943788 CDS
T07454
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121943788 (hnf1ba)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121943788 (hnf1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121943788
NCBI-ProteinID:
XP_042343331
LinkDB
All DBs
Position
5:23808368..23829005
Genome browser
AA seq
573 aa
AA seq
DB search
MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLESLPMSPAPPQS
GKMNGADADSKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVERMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGSGSSMTDKGNQDPMFFFPEFNPSSQGMGQPGEEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLALDAINVPPHSMNPLLSHSSPHHPQSSASPPMRY
SQGPGEVTSSTTISHHSSNAMATSQSVLQQVSPGGLDHSHSLLSPDAKMISGSGGGLPPV
STLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFS
QQLHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYPHKPEPPQYSHPSRFPSAMVVTDANS
ISTLSSMSSSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatcccttcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccagc
ccgccgggttttggagtaaaactggagagcctgcctatgtccccggctccccctcagagc
ggcaagatgaacggggcggacgccgactccaagccggtctttcacacgctcaccaacggc
cacagcaagggcaagctgtccggggacgagggctccgaggacggggacgactacgacaca
ccgccgatactgaaggagctccagtcgctcaacacggaggaggccgcggagcagagggcg
gaggtggagcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaaagggaggtggtggacgtcacggggctgaaccagtct
cacctctcccagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctc
tacacctggtatgtcaggaaacagcgggaaattctcagacagttcaaccaggcagtgcaa
ggctctggcagcagcatgacagacaaaggcaatcaggatccgatgttttttttcccagag
ttcaatccgtccagtcagggcatgggccagcctggtgaagaggtcggcagcgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatgggggcctgcttcccagcaaatcctgtac
caggcctacgaacgacagaagaaccccagcaaggaggagagggaagctttggtagaagag
tgcaacagagctgagtgtctccagagaggcgtctccccctctaaagctcagggcctcggc
tcaaatttggtcactgaagtacgtgtctataactggttcgcaaaccggcgtaaagaagaa
gccttcaggcagaagctggccctggacgccatcaatgtgccgccccacagcatgaaccct
ctgctgtcacacagctcgccacatcatccccagagcagcgcttcacctccaatgcgttac
agccaaggccccggtgaggtcacctcctccacgaccatcagccaccacagtagcaacgcg
atggcgaccagccagtcggtgctccagcaggtgtctccgggaggattggaccacagccac
agtctgctgtcacctgacgccaaaatgatttctggttcaggtggaggacttcctccagtc
agcacactgaccaacatccacagctcccatcacagccatcagcagacacagaacctcatc
atgcctctatctggagtcatggccattgcacagagtttaaacacatcgcagtctcagacg
gtgccagtgatcaacagcgtggctggaagccttgcagcgctccagccggtgcaattttcc
cagcagcttcacagcccccaccagcagagcctgatgcagcagtcccccagccacatgagc
cagcagccgttcatggcgactgtcacacactcgcacatgtatcctcacaagccagagccc
ccgcaatattcccacccatcacgtttcccctcggccatggtagtcacggacgccaacagc
atcagcaccctcagctccatgtcatcaagcaagacggacgctcctgtaaacaagatggtg
caacttgggggtctctcctggtgtcctcttcaagcttggtga
DBGET
integrated database retrieval system
