Plectropomus leopardus (leopard coralgrouper): 121944031
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Entry
121944031 CDS
T07454
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121944031 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121944031 (ttc37)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
121944031 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_11
TPR_16
TPR_14
TPR_17
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
HAT_Syf1_CNRKL1_N
Fis1_TPR_C
ARM_TT21_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
121944031
NCBI-ProteinID:
XP_042343625
LinkDB
All DBs
Position
6:14761015..14779820
Genome browser
AA seq
1569 aa
AA seq
DB search
MSNKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKAELPNVYQKLVELYKSSDKNKCYEMIN
KLSDIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSGCHNEEETDSET
QQHLITAFEKAMVLMDPVPGEEHKKVSADYVKCLSELPQEEAKMKEACESMLSLYPNQTY
PLEVLCSHYLKTGVQNEEAVGCFSRLLDLSPDSGLGHLGRGTKALQEGRFKDAIKDLAQG
LKKMNSSTGWCSLAEAQFKMQRYSDSAISCSQGLTVCGDKDKELRVKLLRLKLEALVRSG
GEKAADQALETFSQIPDAEKDPVLLALKGRAYINKGQVDQALEVSSELVASNPNLAQGFE
LRGRAHLAQGQQQLAEESFLKAVSQSPDCAEYYFLLGQLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLSCVFRYLGHYYREVAKDHARARGCYKKAFEIDSDDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPASIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSFMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRAQVLVPAPLAGLDPNTQSHTLNQAQILKVGERCYARALKLMSEVSSLWYDL
GLNYYHQSRVSCPTEGDQNSPSVLLEKAQQCLKKAIMMESGNHSHWNSLGVVSMSKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQCDPDAFIMLGYLNEHLHLKRQALQAYKRAVELLQSMSSTEELLAF
ALGSYGRALCTSGQLEEAVRVYDSTPLQELSDLAGLALVYCRAGLIPESINAYERALAVA
SSEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHSDATLA
AAALTELLKQGSASGNVIEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLS
RVVPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSKEDSLRNALKTMQ
RAVLLCPDDPATWAGLMAACHTENTACYLSGSAPRRQGLEQTLMSVVSEKVHNVEEIERP
LAQTLEGWVLQQAVTGLMQGGRLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVAGG
GAVLPDSVLEELNNTVMMNPTNLGAWHWLAVVYRSQGLLVQAVMAYRQSLQLASQLGLHS
GQVSSLLRLALLALGPCLAGVPGNDWTNMIQEATTEVLKLGSSPMAQLFQALLQYVTKMA
ARETRRLLERLAYSQDFPVTVVQVASWYLLRHLHAKNDEELINVLLQHAKIHGDQRLLEF
HSQLAASSD
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtaaaaacagccctgaaaagtgccagggaggctataaaaaacaag
gagttcaaagaggctttgaaacactgcaaggctgttttgaaactagagaagaacaattat
aatgcgtgggtattcatcggcttggcagccagtgaactcgagcaaccagatcaggcgcag
acagcttataaaaaggctgtggagctggagcctgagcagctgctggcatggcagggtttg
gcaaatctttatgaaaagactgatcagtgggatttcaaagcagagctgcctaacgtctat
cagaagcttgttgagctgtataaaagctctgacaaaaataaatgttatgagatgatcaat
aagctgtccgatatctatcagtccgaaaaagaatatttaaagttggcaaaggtctggctg
cagctcattcaggtgaaggaggaagaggctgtggacaaaaaagagttactgcagctatgg
caacagatgactcagctcctttcaggctgccataacgaggaagagacagacagtgaaacc
caacagcatcttatcacagcgtttgagaaagccatggttctcatggatcctgtgccggga
gaggaacacaagaaggtgtcagctgactatgtcaaatgtctttccgaactgcctcaagaa
gaagccaaaatgaaagaggcatgtgagtccatgctgtctctctaccccaaccaaacttat
cctcttgaagtcctttgttctcactacctcaaaacaggtgttcagaatgaggaggcagtc
ggctgtttctctcggcttcttgatctgtcccctgacagtggattaggtcacttaggtcgg
ggcaccaaagcactgcaagaaggaaggtttaaagatgccattaaggaccttgcacaaggg
ttgaaaaaaatgaactccagtacaggatggtgcagtctggctgaagctcagtttaaaatg
cagagatactcagacagtgctatatcatgctctcaaggtctgaccgtgtgtggagacaag
gacaaggagctgagggtcaaactgctgaggctgaagctagaggctttagtcaggagtgga
ggagagaaggctgcagaccaggctttggagacattctcacagattccagatgctgaaaaa
gacccagttctgttagcccttaaaggacgtgcatacattaacaagggacaagttgatcaa
gcacttgaggtctcatcagagctggtggcctcgaaccctaacctggctcagggctttgaa
ctgagaggaagggcacacttggctcagggccagcagcagctggcagaggagagtttcctg
aaggcggttagccagagcccagattgtgcagaatattatttcttgctgggacagctctac
tgggacatgggagaagagacccgtaaagaccggagcaaagcccatacacatctgctcaag
gctgcaaagttagacccacacctcagctgtgtattccgctacctgggacattattaccgg
gaggtggcaaaggatcatgcccgggctcggggctgctataagaaggcctttgagatagac
agcgatgatgctgagtctggagccgcctcagtggatctcagtatggaacaggatgatatg
gacactgccttagcaatacttcagtcagtgattgagaaagccactccgggctcagctaaa
tgggcctggatgagacgagggctttactatctgaaggtcggggagcatcaacaagctgtg
gctgacctgcaggcagcgctgagagcagacccagaggactgggtgtgctgggagtgttta
ggtgaggcctacttaaaccgccggagcttcacagcagctctgaaggccttcgggaaggcc
catcagcttcagccagcctccatctacagtgtgtaccaggctgctgccatcaaacagacc
ctgggcaagttcaaagaggcggttgcagagtacttgcagatcacagcacagcaggactat
gttcctgctctcaaaggtctcggggagtgccagctatctctggcaaaaagtttcatggaa
gactgcagagatggaggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagacctgtcgtgtctgtggaagctgctgggagatgcttgcact
gcagtcagcaccgtgtcaccaaacagagcccaggtcctagtgccggctccgctggctggt
ttagatccaaacacccagagccacacactgaaccaggcccagatactcaaagttggtgag
aggtgttatgcccgtgccttgaagctgatgtctgaggtctccagtctttggtatgacctg
ggactcaactattaccaccagtccagggtctcctgtccaacagaaggagaccagaactct
ccgtctgtgctcctggagaaggcccagcagtgtttaaaaaaggctataatgatggaaagt
gggaaccacagccactggaattccctgggagttgtttctatgagcaaaggtcttgagaac
ttcgctctggctcaacattgcttcatcaagtccatacaagtcgaaccaaataatgttgtt
gcttggaccaaccttggtaccctgtatttgaagaaggacaacatagagcttgcacacgag
gcctttaagattgcacagtcactggagccgctttacgtcaactgctggatcggacaggcg
ctgatagcagagagagtgggaagctacgacaccatggatctcttcaggcacaccactgaa
ctcagcacacatatggagggagtgaaaggttatgcctactgggtatgttccaccctgctg
gataagagcaaccgagactctgagctgtaccgctacaatatagtccagatgaacgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtgtgaccctgacgcc
ttcattatgctcggctacctgaatgagcatctgcacttgaagaggcaggccttacaggct
tacaaaagagctgttgaacttcttcagtccatgtcctcgacagaggagctgctggctttc
gctctaggaagctatggccgtgctttgtgcacctcaggccagttggaggaggcggtgcgt
gtttatgattccactccactgcaggagctcagtgatttggccggcctggctctggtctac
tgcagggcaggactcatcccagagagcattaacgcctatgaacgcgccttggctgtggcg
tccagtgagaaggagaaggcttacatcttgacagctctggcgctgcttcagcaccggcag
ggtaacctggactcagccaagactctgctgtttaaatgctcgatgttaaaggagcccatc
tcagagtccctgctctgtttatgtgccctgggattggtccacagtgatgctacactagct
gctgctgctctcaccgagctgctgaagcaaggctcagcctctgggaatgttatagagcag
cgatgtctgctcacctgtgccttgctcgctctgcagggtaactacagcgcagtgcagaga
gaggcttccagagctgtgcacagcaatcctggaaacccctctctgtgggctttgctgtcc
agggtggtaccacaatactaccccaggaaggcaaatggcggagcgatggctggtcatgtt
gcctgtctctccagtatgacccaaggaaagagggcgttgttgtacagtggagtgaaccag
ctagccagtggaagacactccaaagaggacagtctcaggaatgcattgaagacaatgcag
agagctgtgctgctctgtcctgatgatccagcaacatgggcgggattaatggctgcctgt
cacacagaaaacaccgcctgttatctctctggttctgctcctcgcagacaaggactggag
caaaccctcatgtcagtggtgtctgagaaagtgcataatgtggaggagatagagcgccct
ctagcccagactctagaaggctgggtgttgcagcaggcagtgactggtctcatgcagggg
gggcggctggagcaggcagaagccctctgctcacaggtgctgaatgtttctcctgaacac
ccagcagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttgtggccggtggt
ggtgctgtcctcccagactctgtgcttgaggaacttaacaacactgtaatgatgaacccc
accaacctcggggcgtggcattggctggctgtggtgtatcggagtcagggcctcttggtt
caggcagtcatggcctacaggcagagtctgcagctcgcctcacagctcggcctgcacagc
ggccaggtatccagcctgctgcgactagccctgcttgccctaggaccctgtttggccggt
gtcccgggaaacgactggaccaacatgatacaagaagccaccactgaggtcctgaagctt
ggttcatcccctatggcccagcttttccaggccctgctccagtatgtgaccaagatggct
gcgagggaaacgaggcgtttgttggagaggctggcatactcccaagacttcccagttacg
gtggtacaggtggccagctggtacctcctcaggcacttgcacgccaaaaacgacgaggag
ctaataaatgtccttttgcagcatgccaaaattcatggagatcaaagactgctggagttt
cattcacagcttgccgcttcatcagactga
DBGET
integrated database retrieval system
