Plectropomus leopardus (leopard coralgrouper): 121944111
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Entry
121944111 CDS
T07454
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plep02000
]
121944111 (tmc1)
03037 Cilium and associated proteins [BR:
plep03037
]
121944111 (tmc1)
Transporters [BR:
plep02000
]
Other transporters
Pores ion channels [TC:
1
]
121944111 (tmc1)
Cilium and associated proteins [BR:
plep03037
]
Other cilia and associated proteins
Stereociliary proteins
121944111 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Piezo_TM1-24
UPF0542
Motif
Other DBs
NCBI-GeneID:
121944111
NCBI-ProteinID:
XP_042343723
LinkDB
All DBs
Position
6:complement(12304446..12312203)
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AA seq
891 aa
AA seq
DB search
MGGGKDHPELKKGKRNQRPGLRKEKRAGEREQGVIKKKLEEEKDEEGEGEERNAKGKKKH
GSAKKEERDDDGGKHAVKDRATEVKKKKHKKVVETSSEQETSEEDDSEEEDNKETEVRPE
SLSPEELEKLKEAVDERKKLIQGLRGKPWPMKKKLVTLRESQEFVEKYEGALGKGKGRKL
YAYKVMMTKKCMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMIL
FCLTFGLVMVPEALMGRPYGSIPRKTVPRAEESSAMDFAVLWDFGGYAQYSVLFYGYYNN
QRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANETGVGDDNSFNFSWKMFTSWD
YLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAGSGYL
IYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRVALQWQ
LGRIFALFLGNLYTFIIALMDEINLKREEEKIVKFNITTWEASLYNGTVSENSTAPPITI
QPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAGF
PSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQER
VFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKKRMFDVIQETLESDF
PAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVELKKKLQTQNEENKKKN
KRAALKAQMDLEEARNAASQAAEQQKNNTTSPQDQEDEEEECSSSSQRQYHGKNGRHPSP
PVRDQERKLSATRAPVPRTYHHGNHGSPGYLPGFPRQGEPRMYRVPSLQRH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggaaaagatcatccagagctgaagaaggggaagaggaatcagaggccaggc
ctgagaaaagagaaaagggcaggagaaagagagcaaggcgtgatcaagaaaaaactggag
gaggagaaggacgaggagggtgaaggtgaagaaaggaatgccaagggaaaaaagaaacac
ggaagtgccaaaaaagaagagagagatgatgatggtggtaaacatgcagtgaaggacaga
gcaacagaggtgaagaagaaaaagcacaaaaaagtagttgaaacaagttcagagcaggag
acgagtgaagaagatgacagtgaagaagaagacaacaaggagacggaggtgaggccagag
tctctgtcaccagaggagctggagaagctgaaggaggctgtggatgagagaaagaaactg
atccaaggtctcaggggaaaaccctggccaatgaaaaagaaacttgtgactttacgggag
tctcaggagtttgtggagaaatatgagggagctttggggaaagggaaaggcaggaaactc
tatgcctacaaagttatgatgaccaagaaatgcatgaagtttcaacgggactttgaaaac
ttcaaaacagcttgtattccatgggagatgaaaatcaaagagattgaaagtcattttggc
tcctcagttgcctcttacttcatcttcctgaggtggatgtatggcatcaacatgatcttg
ttttgtcttacatttggcctggtcatggtgccagaggcattaatggggcgaccctatggc
agcatcccaagaaagaccgtccccagggcggaggagagcagtgccatggactttgctgtc
ttatgggactttggaggttatgctcagtattcagtcctcttctatggttactacaacaac
cagcgtgccattggctggctcaagttccgtatgcctctgtcatactttctggttggtgtg
ggaacagtggcatatagctacatggtggtcataagaacgatggcccgtaatgcaaatgag
acaggggttggagatgataacagctttaatttcagctggaaaatgttcaccagctgggac
tacctgataggaaaccctgaaactgcagacaataagtttgcctccatcaccaccagtttc
aaggaggcaattttagaggagcaggaaagccgaaaagatgacaacatccacctgactcgt
tttctgcgtgtgctggccaacttcctggtcttgtgctgcttggcaggaagtggatacctc
atctactttgtagtgcgccgctcacagaagtttgcccttgatggactggagaatcacacc
tggtgggaaagaaatgaggtgaacatggtcatgtcactactggggatgttctgccccatg
ctgtttgatgtcatcagcgccctagagaactaccaccctcgtgtcgccctgcagtggcag
ctgggccgcatctttgccctgtttttgggaaatctctacaccttcatcattgcactcatg
gacgagatcaacctcaaaagggaagaggaaaagatagtcaaatttaatataaccacgtgg
gaagccagtctttataatggtacagtgtcagaaaacagcacggctccacccatcactatt
cagcctgctgacgtgcccagagggccctgctgggagaccatggtgggccaggagtttgtc
cgtctgatcatatctgacaccatgacaacctacatcacgctgctgatcggcgacttcctg
agagccgtgcttgttcgttttctcaactactgctggtgttgggaccttgaggccggattt
ccatcctactctgagtttgatgtcagtgggaacgtactgggcctgatcttcaatcaaggg
atgatatggatgggtgctttctatgccccctgcctgccagccctgaacgtcctccggctc
catgtgtccatgtacctgcagtgttgggccgtgatgtgctgcaatgttccgcaggaaagg
gtcttcaaggcctctggctccaacaacttctacatggctatgttgctggttatcctcttc
ctgtccactctgcctgccatctacaccattgtcactatccccccttcctttgactgcggg
cccttcagtgggaaaaaacgtatgtttgatgtgatccaggagactttggagtcagacttt
cctgcctggtttagtaaagtgttcagttatgcctctaaccctggactggtgctgcccttc
atattgcttatggtactggccatttattacttgcaatccacatccaaaagctacaaagaa
gcaaatgtggaactgaagaaaaaacttcaaacgcaaaatgaggagaacaagaagaagaac
aaacgagcagccttgaaggcacaaatggatctagaggaggccagaaacgctgcatcccag
gctgcagagcaacaaaagaacaacaccacttctccacaagaccaagaagatgaggaagaa
gaatgcagcagtagtagtcagaggcagtatcatggcaagaatggacgccacccttctcct
ccagttagagaccaagaacgcaaactttcagccaccagagcccctgtccccaggacctat
caccacggtaaccacgggtctcctgggtatctgcccggtttccctcggcaaggtgaaccc
aggatgtacagggtgccgagtctgcagagacactga
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