Plectropomus leopardus (leopard coralgrouper): 121944159
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Entry
121944159 CDS
T07454
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04142
Lysosome
plep04144
Endocytosis
plep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121944159 (cltcl1)
04142 Lysosome
121944159 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121944159 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121944159 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121944159 (cltcl1)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121944159 (cltcl1)
Exosome [BR:
plep04147
]
Exosomal proteins
Proteins found in most exosomes
121944159 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
121944159
NCBI-ProteinID:
XP_042343797
LinkDB
All DBs
Position
6:26821916..26853584
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTLESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTV
ALVTDTAVFHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEEIFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRDNSPCVLRAAEQSHLWAELVFLYDKYEEFDNAAITMM
SHPTDAWKEGLFKDIIAKVANVELYYKSLTFYLEYKPLLLNDLLSILSPRLDHSRAVTFF
SKVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEADSQRKTEEEVTEPQPIVFGQQLMLPASPATVAPQQAYQGYGYPTAPAGFPAAPA
YGFNM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggtgtg
aacccagccaacattggtttcagctatctgaccttggagtcagacaagttcatctgcatc
agagagaaggttggcgagcagaaccaggtggtgatcgtggacatgtctgaccccactaac
ccgatcaggagaccgatctccgccgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagacgctgccaagacactgcagatcttcaacattgagatgaagagtaaggtg
aaggctcatacaatgacagaggaggtcatgttctggaagtggatatctgtaaacaccgtt
gccttggtgacagatacggccgtctttcactggagcatggagggtgattcccaacccact
aaagtattcgatcggcacgccagtctggccggatgtcagatcatcaactacagaactgac
gaacaacagaagtggctgctgctgatagggatttctgcacagcaaaaccgtgtggtcggg
gcgatgcagctgtattctgttgacaggaaagtgtcccagcccatcgagggccacgctgct
gccttcggggagttcaaagtggagggaaatgccaaaccgtccaccctcttctgctttgct
gtgcgctcacaggcagggggaaagttgcacattattgaagttggtcagccagctgcagga
aatcagccatttgctaagaaagcagtggacgtgttcttcccaccagaggcccagacagac
tttcctgtagctatgcagattggtagtaagcacggtgtaatatatttgattacaaagtac
ggttacattcacctgtatgacttggagtctggagtgtgcatctacatgaaccgaatcagt
gcagagaccatctttgtaactgccccgcatgaagccacctcaggaattattggggtcaac
aagaagggacaggtcttgtcagtgtgtgttgaggaggaaaatattgtgaactatgccacc
aacgtcctgcagaaccctgatctagccttgaggatggctgtgaggtcaaatcttgctggg
gctgaggaaatttttgccaggaagtttaatactctgtttgcccagggaagttattcagag
gctgcaaaggttgctgcatcagcaccaaagggtatcctgcggacagcagagaccatccgt
aagtttcagagtgtcccagcccagccaggtcaggcctctccactgttgcagtactttggt
attctgctggatcaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtc
ctgcagcagggccgcaagcagctcctggagaagtggttgaaggaggacaagctggagtgc
tcagaggagctgggagacctggtgaaggcctctgatcccacccttgcacttagtgtttac
ctcagagctaacgtccccaacaaggttatccagtgctttgctgagaccggacaattccag
aagatagtgctgtatgctaaaaaggtcggctacaccccagactgggtgtttttgctcaga
aatgtgatgcgggtcaatcctgaccagggactgcagtttgcccagatgctggtccaggat
gaggaaccgctggccaacatcaaccagattgtagatgtgttcatggagggcaacttgatc
cagcagtgcacctccttcctgttggatgctctaaagaacaaccgccccgccgaaggacac
ttacagacacgtctgcttgagatgaacctcatacatgcccctcaggtagcagatgcaatc
ctggggaaccagatgttcacacattatgaccgtgcccacgttgctcagttgtgcgagaag
gcaggtctgctgcagagggctcttgaacactacaccgacctgtatgatatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtgaacttctttggctctttatca
gtagaagactcgttggagtgtttaagggccatgttgtcggctaacatcaggcagaacctg
cagctatgtgtccaggtagcgtctaagtatcatgagcagctggggactcaggcattagtg
gagctctttgaatccttcaagagttatgagggcttgttttacttccttgggtcgattgtg
aatttcagccaagagcctgacgttcacttcaagtacatccaggctgcctgcaaaacaggc
cagatcaaagaagtggagagaatctgtagagagagcaactgctatgacccggagagggtt
aaaaacttcctcaaggaggcaaagctaacagaccagcttcctctcatcattgtgtgtgat
cgctttgacttcgtccatgacttggtgctctacctctaccgcaacagtctacagaaatac
attgaaatctatgtacagaaagtgaaccccagtcgtttaccggtggtgataggcggtctg
ttagatgtcgactgttctgaggacgtcattaagaacctgatcatggtggtcagagggcag
ttttccactgatgagctggtggaggaggtagagaagaggaacaggttaaaacttctattg
ccatggctggagtcccgaatccatgaagggtgtgaggagccggctacccacaatgcccta
gcgaagatctacatcgacagcaacaacacccctgagcgcttcctgaaagagaacccattc
tatgacagtgctgtggtcgggaaatactgcgagaagagagaccctcacctggcctgcgtg
gcttatgagagaggacagtgtgacctggacctcatcaaagtgtgcaatgagaactcgtta
ttcaagagtgaggctcgatatctggtgcgacggaaagacccagagctttgggcaaacgtc
ttagaagaaaataaccccttcagaagacaactcattgaccaggtggtgcagacagcactg
tcagagacccaggacccggaggaggtatcagtcacagtcaaagcctttatgactgcagat
ttgcccaacgagttgattgagctgctggagaagattgtactggataactctgtcttcagt
gaacacagaaacctccagaacctcctgattttgacggccatcaaggcggaccgcacccgt
gtgatggagtacatcaacaggctagacaactacgatgctccagacatcgccaatattgcc
atcagcaatgagctctttgaagaagcgtttgccatttttaagaagtttgatgttaatacc
tcagccatacaggtattgatagagcacatagggaacttagatcgtgcctatgagtttgct
gagcgctgtaatgagcctgcagtgtggagccagttagccagagctcagctacaaagagac
ctggtcaaggaggccattgactcatatatcaaagccgttgacccttcagcgtacatggag
gtggttaatgcagccagcaagaacaataactgggaggacttggttaaattcctccagatg
gctcgaaagaaggcgagagagtcatacgtagagacagagctgatcttcgctttagcgaaa
acaaatcgtctggctgagctggaagagtttgttagtgggccgaacaatgctcacatacag
caggtgggcgatagatgttatgatgaaggtatgtatgaagcagccaagctcctgtacaac
aacgtttccaactttgctcgcctcgcatccacactcgttcacctcggagagtaccaggca
gctgtggatagtgccaggaaagccaacagcacacggacatggaaggaggtgtgttttgcg
tgtgttgacggggaggagtttcggttggcacaaatctgcggccttcacatagtgatccac
gctgacgagctggaggacctgatcagctactatcaggaccgtggctactttgaggaactc
attgccctactcgaggcggcgctgggtctggagcgggcccacatgggcatgttcaccgag
ctcgccattctctactcaaagttcaaacctcagaagatgagggagcacctggagctcttc
tggtccagagacaacagcccgtgtgtccttcgtgcagcggagcagtctcatctatgggcg
gagctggttttcctttacgataaatatgaggagtttgacaatgctgccatcacaatgatg
tcccatccaacagatgcatggaaagaagggctgttcaaggacattattgctaaggttgcc
aatgtggagttgtactataaatctcttaccttctacctggaatacaaaccgctcttactg
aatgacctgctgagcattctgtctccgcggttggaccacagccgagctgtcacctttttc
agcaaggtgaaccagctgaagttggtcaagccttacctgaggtctgtccagaatcacaac
aacaagtccgtcaacgaagccctcaacaacttgctgacagaggaggaagactaccagggc
ctgagagcatccatcgatgcctatgacaactttgacaccattggcctggcgcagaggtta
gagaaacatgaactgattgagttcagacgtatcgctgcttacctgtacaaaggcaacaac
cgctggagacagagtgtagagctctgcaagaaggacaaactctacaaggatgccatgctg
tacgctgcagagtctaaggatgcagagctggcagagactctgctccagtggttcctggag
gaaggtaggaaggagtgtttcgctgcctgcctgttcgcctcctatgacctgctacaccct
gacgtggtgctggagctggcctggaggcacaacatcatggactttgccatgccgtacttc
atccaggtcatgcgagagtacctgacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactggaggaggcagacagccaaaggaaaactgaagaggaggtgacagaacctcag
ccgatagtgtttggtcagcagctgatgttgcctgcctctcctgctacagtggctccacag
caagcgtaccaaggctacggttaccccaccgcccctgcaggcttccccgctgcacctgct
tacggcttcaacatgtag
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integrated database retrieval system
