Plectropomus leopardus (leopard coralgrouper): 121944245
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Entry
121944245 CDS
T07454
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03030
DNA replication
plep03410
Base excision repair
plep03420
Nucleotide excision repair
plep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121944245 (rfc5)
03410 Base excision repair
121944245 (rfc5)
03420 Nucleotide excision repair
121944245 (rfc5)
03430 Mismatch repair
121944245 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plep03032
]
121944245 (rfc5)
03036 Chromosome and associated proteins [BR:
plep03036
]
121944245 (rfc5)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121944245 (rfc5)
DNA replication proteins [BR:
plep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121944245 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
121944245 (rfc5)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121944245 (rfc5)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121944245 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
121944245 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_22
RuvB_N
AAA_14
ResIII
DEAD
DUF815
AAA_24
AAA_16
AAA_assoc_2
PhoH
nSTAND_NTPase5
AAA_7
AAA_19
ATPase_2
AAA_5
AAA_30
TIP49
DNAX_ATPase_lid
nSTAND3
AAA_2
Thioredoxin_6
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
121944245
NCBI-ProteinID:
XP_042343910
LinkDB
All DBs
Position
6:31153530..31160166
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSKAPLQTRNLPWVEKYRPQRLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACAKQLYKEKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVVQQESIDINPGGMKAIVTLSSGDMRRSLNILQSTSMAYGEVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILQLKTLKGLALHDILTEVHLLIHRVDFPPAIRIGLLIKLA
DIEHRLASGTNEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacaagtaaagcgccactacaaaccagaaacttaccatgggttgaaaaatac
agaccacagagacttgatgatctgatctcgcacaaagatatcctaagcaccatccagagg
tttatcagtgaggacaagctcccccatctcttgttctacggcccccctggaactggcaaa
acctccaccatcctcgcttgtgccaagcagctgtacaaggaaaaagagttcaactccatg
gtgttggagctaaacgcatcagatgacagaggcattgatgttgtgagaggtcccattctg
agttttgcgagcaccaggaccatcttcaagaaaggcttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagtttaca
gaaaacacccgattctgtctcatctgtaactacctgtccaagatcatcccggctctgcag
tctcgttgcaccaggtttcgcttcggcccgctctccccggaccagatgatccctcggctg
gagcacgtcgtccagcaggagagtattgacataaatccaggtggaatgaaggccattgtg
accttatcatcaggtgatatgagaagatcgctcaacatactgcagagcacctccatggcg
tacggggaggtcacagaggacacggtgtacacctgcacaggtcaccccctccgctcagat
atagcgaacatcctcgactggtccctcaacaaagatttcaccacagcgtacaagcaaatc
ctgcagctgaagactctgaaaggtttggctctgcatgacatcctcactgaggttcatctg
ctcatacacagagtggactttcctccagcgattcggatcggtctgctcatcaagttggct
gacattgaacacaggctcgcctcaggaactaacgagaagatccagctcagctccatggtc
gcagcgttccaggcggtcagagacctcgtggttagcgaggcttcctag
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integrated database retrieval system
