KEGG   Plectropomus leopardus (leopard coralgrouper): 121944366
Entry
121944366         CDS       T07454                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
plep  Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03420  Nucleotide excision repair
plep04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:plep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121944366 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121944366 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plep04121]
    121944366 (ercc8)
   03400 DNA repair and recombination proteins [BR:plep03400]
    121944366 (ercc8)
Ubiquitin system [BR:plep04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     121944366 (ercc8)
DNA repair and recombination proteins [BR:plep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121944366 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_1st WD_LRWD1 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 121944366
NCBI-ProteinID: XP_042344068
LinkDB
Position
6:complement(22983865..23001199)
AA seq 401 aa
MLGFLAARQAGLDDPLRLRRAESTRRLLSLNLNPDRDVDRVHGNGINTIDIEVIEGRYML
SGGADGVIVIYDLENYSGKPQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLVAVGTKDPKIQLCDLKSGSKIH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGSLFTLDQHNGDKSKVSSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSVAMYTLHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRASDVEEESKSANQAAADQSTVNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttggggttcctggcagcaaggcaggccggtctggatgaccctctacgactcagacgt
gcagagtcaacgagaaggctcctgagtctgaacttgaatcctgacagagacgtggacaga
gtccatggaaatggcatcaacaccattgacattgaagtaatagagggaagatacatgttg
tctggaggagcagatggagtgatcgtcatctacgacctggagaactacagcgggaaacca
cagtacacctgcaaggccgtttgtacagtaggcaggtcgagtcggtatgtccacaaattc
agtgtcgagacagtccagtggtatccctatgacacaggcatgtttgtctccagttccttt
gacaaaaccatgaaagtctgggacactgagacactgaagcctgctgaagtcttcgagttt
gagggcaatgtctacagccaccacctgtcccccatcgccaggaagcacagtctcgtcgca
gttggcaccaaagatcccaaaatccagctgtgtgacctgaagtctggctcgaagattcac
gttcttcagggtcacagagcagaggtcttgtctgtgcggtggtcgcccagatacgagcac
atcttagccactgccagtgcagacagcaaagtgaaagtttgggatgtgcgccgggcttct
ggtagtctcttcactctggatcagcacaatggagacaagtcaaaagtctcgtctgaggca
gtgaacacagctcataatggcagagtgaacggcctgtgctttactggtgatggcctctac
ctcctcaccactggaactgacgaccgtatgcgactgtggaatagtgccacaggggaaaac
acattggtaaattacgggaaagtctgcaacgagagtcgtaaaagacttcagttcaccgtg
tcacgaggctgcagcccagaatttgtctttgtaccatgcggcagctcagtagccatgtat
accctccacacgggagagctggtcactatgcttcggggtcactacaacaacgtcgactgc
tgcgagttccacccagactaccaggagctgtacagtggaggtaaagactgtaatatcctg
gcgtgggttcctgttcttcgtgcctcagatgtggaagaagaatcaaagagtgccaatcag
gctgctgctgaccagtcgacagtgaaccctgcctttcaggacgcatggagcagtgatgaa
gattaa

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